Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_I10
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.1  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              23   1.9  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    22   4.5  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    22   5.9  
AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength rhodo...    22   5.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +2

Query: 236 LQYRAHGKKHNDAQSHQRPPGQQSSPRETVATHQGQRWLR 355
           LQ   H  +    Q H RP  QQ   ++     Q +R LR
Sbjct: 144 LQNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQRQEERRLR 183


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -2

Query: 193 TLSAPTMKHFGYSSQELDDLNE 128
           T+ +  MK  G + Q +DD+NE
Sbjct: 28  TVQSVCMKEIGTAQQIIDDINE 49


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 364 RVNTKPTLPLMCGNSFSRAGLL 299
           R +T P    +CG +FSR  LL
Sbjct: 37  RTHTLPCKCHLCGKAFSRPWLL 58


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 331 CGNSFSRAGLLSRWSLMALRIIVFF-PMSTIL 239
           CG  +   GLLS   L+   I V+F P+  I+
Sbjct: 202 CGTDYFNRGLLSASYLVCYGIWVYFVPLFLII 233


>AF091732-1|AAD02869.2|  154|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 154

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 331 CGNSFSRAGLLSRWSLMALRIIVFF-PMSTIL 239
           CG  +   GLLS   L+   I V+F P+  I+
Sbjct: 78  CGTDYFNRGLLSASYLVCYGIWVYFVPLFLII 109


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 577 TGLQDVYIVDDFN 539
           TG+ D+++ DD N
Sbjct: 114 TGISDLFVFDDLN 126


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,208
Number of Sequences: 438
Number of extensions: 4520
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)