Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_H07
         (395 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.      89   7e-18
BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25 p...    89   7e-18
BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25 p...    89   7e-18
BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25 p...    89   7e-18
AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25 p...    89   7e-18

>M64716-1|AAA16105.1|  125|Homo sapiens ribosomal protein protein.
          Length = 125

 Score = 88.6 bits (210), Expect = 7e-18
 Identities = 52/107 (48%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
 Frame = +1

Query: 64  KHRRRRKDPV---AAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCTRQVPQYKLITPAVV 234
           K  ++ KDPV     K +++   K K                    ++VP YKLITPAVV
Sbjct: 14  KSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVV 73

Query: 235 SERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDDPVA 375
           SERLK+RGSLAR AL EL  KGLIK V +H  QVIYTR TKG D  A
Sbjct: 74  SERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120


>BC004986-1|AAH04986.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score = 88.6 bits (210), Expect = 7e-18
 Identities = 52/107 (48%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
 Frame = +1

Query: 64  KHRRRRKDPV---AAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCTRQVPQYKLITPAVV 234
           K  ++ KDPV     K +++   K K                    ++VP YKLITPAVV
Sbjct: 14  KSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVV 73

Query: 235 SERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDDPVA 375
           SERLK+RGSLAR AL EL  KGLIK V +H  QVIYTR TKG D  A
Sbjct: 74  SERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120


>BC004294-1|AAH04294.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score = 88.6 bits (210), Expect = 7e-18
 Identities = 52/107 (48%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
 Frame = +1

Query: 64  KHRRRRKDPV---AAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCTRQVPQYKLITPAVV 234
           K  ++ KDPV     K +++   K K                    ++VP YKLITPAVV
Sbjct: 14  KSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVV 73

Query: 235 SERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDDPVA 375
           SERLK+RGSLAR AL EL  KGLIK V +H  QVIYTR TKG D  A
Sbjct: 74  SERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120


>BC003537-1|AAH03537.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score = 88.6 bits (210), Expect = 7e-18
 Identities = 52/107 (48%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
 Frame = +1

Query: 64  KHRRRRKDPV---AAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCTRQVPQYKLITPAVV 234
           K  ++ KDPV     K +++   K K                    ++VP YKLITPAVV
Sbjct: 14  KSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVV 73

Query: 235 SERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDDPVA 375
           SERLK+RGSLAR AL EL  KGLIK V +H  QVIYTR TKG D  A
Sbjct: 74  SERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120


>AB061844-1|BAB79482.1|  125|Homo sapiens ribosomal protein S25
           protein.
          Length = 125

 Score = 88.6 bits (210), Expect = 7e-18
 Identities = 52/107 (48%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
 Frame = +1

Query: 64  KHRRRRKDPV---AAKPRRRSGPKEKFVTS*TTRCCLINPHMRNCTRQVPQYKLITPAVV 234
           K  ++ KDPV     K +++   K K                    ++VP YKLITPAVV
Sbjct: 14  KSAKKDKDPVNKSGGKAKKKKWSKGKVRDKLNNLVLFDKATYDKLCKEVPNYKLITPAVV 73

Query: 235 SERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGDDPVA 375
           SERLK+RGSLAR AL EL  KGLIK V +H  QVIYTR TKG D  A
Sbjct: 74  SERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,087,543
Number of Sequences: 237096
Number of extensions: 1440606
Number of successful extensions: 3382
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3376
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2813442310
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)