Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_H01
         (399 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   3.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   3.0  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   3.0  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    20   9.1  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -1

Query: 132 TVCWKNLDAIWRVTNIFXCSALCVVSFI 49
           TV WK  D + R+   F    L + SF+
Sbjct: 101 TVSWKAGDVMCRIMAFFRMFGLYLSSFV 128


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 151 FAMVATHCLLEESRCNLA 98
           + + A HC+++E+   LA
Sbjct: 197 YVLTAAHCIIDENTTKLA 214


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 159 SSPPPWXELPVPKGSWQSHH 218
           SSPP   +LP+    +QSHH
Sbjct: 59  SSPPEHRDLPI----YQSHH 74


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 84  FXCSALCVVSFIHFVSRST 28
           F C   CV   +HF+  +T
Sbjct: 52  FGCFEACVFQKLHFMDGNT 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,995
Number of Sequences: 438
Number of extensions: 1837
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)