Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_G21
(360 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12 pro... 111 8e-25
BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12 p... 111 8e-25
BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12 p... 111 8e-25
BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12 p... 111 8e-25
AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12 ... 111 8e-25
AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12 v... 111 8e-25
AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Riboso... 107 8e-24
BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein. 76 4e-14
BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C... 49 4e-06
AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C... 49 4e-06
BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member ... 46 3e-05
BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing ... 30 2.5
AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens ... 30 2.5
AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein. 30 2.5
BC016613-1|AAH16613.1| 571|Homo sapiens similar to hypothetical... 29 4.3
AE006464-2|AAK61234.1| 871|Homo sapiens unknown protein. 29 4.3
AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens ... 28 7.6
AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activat... 28 7.6
AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein. 28 7.6
>L06505-1|AAA36157.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 111 bits (266), Expect = 8e-25
Identities = 53/74 (71%), Positives = 60/74 (81%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWXGSQESL 302
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW G + ++
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 303 GS*QFKTKQPQIXV 344
+ +Q QI V
Sbjct: 61 -KLTIQNRQAQIEV 73
>BC105603-1|AAI05604.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 111 bits (266), Expect = 8e-25
Identities = 53/74 (71%), Positives = 60/74 (81%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWXGSQESL 302
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW G + ++
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 303 GS*QFKTKQPQIXV 344
+ +Q QI V
Sbjct: 61 -KLTIQNRQAQIEV 73
>BC094831-1|AAH94831.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 111 bits (266), Expect = 8e-25
Identities = 53/74 (71%), Positives = 60/74 (81%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWXGSQESL 302
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW G + ++
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 303 GS*QFKTKQPQIXV 344
+ +Q QI V
Sbjct: 61 -KLTIQNRQAQIEV 73
>BC050644-1|AAH50644.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 111 bits (266), Expect = 8e-25
Identities = 53/74 (71%), Positives = 60/74 (81%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWXGSQESL 302
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW G + ++
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 303 GS*QFKTKQPQIXV 344
+ +Q QI V
Sbjct: 61 -KLTIQNRQAQIEV 73
>AL445222-15|CAH72929.1| 165|Homo sapiens ribosomal protein L12
protein.
Length = 165
Score = 111 bits (266), Expect = 8e-25
Identities = 53/74 (71%), Positives = 60/74 (81%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWXGSQESL 302
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW G + ++
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 303 GS*QFKTKQPQIXV 344
+ +Q QI V
Sbjct: 61 -KLTIQNRQAQIEV 73
>AB209471-1|BAD92708.1| 197|Homo sapiens ribosomal protein L12
variant protein.
Length = 197
Score = 111 bits (266), Expect = 8e-25
Identities = 53/74 (71%), Positives = 60/74 (81%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWXGSQESL 302
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW G + ++
Sbjct: 33 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92
Query: 303 GS*QFKTKQPQIXV 344
+ +Q QI V
Sbjct: 93 -KLTIQNRQAQIEV 105
>AL021366-3|CAA16156.1| 165|Homo sapiens cICK0721Q.2 (60S Ribosomal
Protein L12 LIKE protein) protein.
Length = 165
Score = 107 bits (258), Expect = 8e-24
Identities = 52/74 (70%), Positives = 59/74 (79%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWXGSQESL 302
MPPKFDPNEIK+V LRC GEVGATS+LAPKIGPLGLSPKKVGDDIAKAT DW G + ++
Sbjct: 1 MPPKFDPNEIKVVYLRCTRGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60
Query: 303 GS*QFKTKQPQIXV 344
+ +Q QI V
Sbjct: 61 -KLTIENRQAQIEV 73
>BC059950-1|AAH59950.1| 132|Homo sapiens RPL12 protein protein.
Length = 132
Score = 75.8 bits (178), Expect = 4e-14
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = +3
Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 233
MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGL
Sbjct: 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGL 37
>BX088650-2|CAM26293.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 49.2 bits (112), Expect = 4e-06
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -1
Query: 279 SHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 184
SH PWQCHH PF ETD R GP WHRL
Sbjct: 87 SHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>AL662799-3|CAM25565.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 49.2 bits (112), Expect = 4e-06
Identities = 20/32 (62%), Positives = 20/32 (62%)
Frame = -1
Query: 279 SHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 184
SH PWQCHH PF ETD R GP WHRL
Sbjct: 87 SHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118
>BX248088-14|CAM25707.1| 203|Homo sapiens kinesin family member C1
protein.
Length = 203
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = -1
Query: 279 SHLWPWQCHHPPF*ETDQEDRF*GPKMMWHRL 184
SH PWQCHH PF TD R GP WHRL
Sbjct: 87 SHPLPWQCHHQPFLVTDPGGRSWGPGQKWHRL 118
>BC014077-1|AAH14077.2| 724|Homo sapiens GRAM domain containing 1A
protein.
Length = 724
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 141 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 263
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 206 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 250
>AK074914-1|BAC11289.1| 713|Homo sapiens protein ( Homo sapiens
cDNA FLJ90433 fis, clone NT2RP3000721. ).
Length = 713
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 141 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 263
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 199 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 243
>AB040966-1|BAA96057.1| 651|Homo sapiens KIAA1533 protein protein.
Length = 651
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = +3
Query: 141 PNEIKIVNLRCVGGEVGATSSLAPKIGPLGL----SPKKVGDDIA 263
P E+ + +C G E+G TS + PL L +PK+VGD IA
Sbjct: 136 PRELWHLVHQCYGSELGLTSEDEDYVSPLQLNGLGTPKEVGDVIA 180
>BC016613-1|AAH16613.1| 571|Homo sapiens similar to hypothetical
protein FLJ13841 protein.
Length = 571
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 204 LAPKIGPLGLSPKKVGDDIAKATSDWXGSQESLG 305
L P+ GP+ SP+ VG+D+ +A D+ ++ LG
Sbjct: 391 LQPR-GPVPGSPEHVGEDLTRALGDYARVEQRLG 423
>AE006464-2|AAK61234.1| 871|Homo sapiens unknown protein.
Length = 871
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 204 LAPKIGPLGLSPKKVGDDIAKATSDWXGSQESLG 305
L P+ GP+ SP+ VG+D+ +A D+ ++ LG
Sbjct: 391 LQPR-GPVPGSPEHVGEDLTRALGDYARVEQRLG 423
>AK128030-1|BAC87237.1| 2427|Homo sapiens protein ( Homo sapiens
cDNA FLJ46149 fis, clone TESTI4000621, moderately
similar to Homo sapiens Snf2-related CBP activator
protein (SRCAP). ).
Length = 2427
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +3
Query: 210 PKIGPLGLSPKKVGDDIAKATSDWXGSQESLGS*QFKTKQPQIXVGSL 353
P GP L PKK DIA A +L + Q KT P + G L
Sbjct: 571 PTPGPTTLGPKKEITDIAAAAESLQPKGYTLATTQVKTPIPLLLRGQL 618
>AF143946-1|AAD39760.1| 2971|Homo sapiens transcriptional activator
SRCAP protein.
Length = 2971
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +3
Query: 210 PKIGPLGLSPKKVGDDIAKATSDWXGSQESLGS*QFKTKQPQIXVGSL 353
P GP L PKK DIA A +L + Q KT P + G L
Sbjct: 374 PTPGPTTLGPKKEITDIAAAAESLQPKGYTLATTQVKTPIPLLLRGQL 421
>AB002307-1|BAA20768.2| 3053|Homo sapiens KIAA0309 protein.
Length = 3053
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +3
Query: 210 PKIGPLGLSPKKVGDDIAKATSDWXGSQESLGS*QFKTKQPQIXVGSL 353
P GP L PKK DIA A +L + Q KT P + G L
Sbjct: 552 PTPGPTTLGPKKEITDIAAAAESLQPKGYTLATTQVKTPIPLLLRGQL 599
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,978,679
Number of Sequences: 237096
Number of extensions: 1120325
Number of successful extensions: 2010
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2010
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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