Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_G16
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81030-8|CAB02716.1|  421|Caenorhabditis elegans Hypothetical pr...   134   7e-32
AC024859-27|AAK29978.4|  337|Caenorhabditis elegans Hypothetical...    64   8e-11
Z81564-8|CAB04571.1|  140|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z81030-8|CAB02716.1|  421|Caenorhabditis elegans Hypothetical
           protein C01G10.10 protein.
          Length = 421

 Score =  134 bits (323), Expect = 7e-32
 Identities = 65/174 (37%), Positives = 102/174 (58%), Gaps = 1/174 (0%)
 Frame = +2

Query: 125 STLIFGIETSCDDTGCXXXXXXXXXXXXSLKSQNLVHLRNGGIIPDVAQDLHRKYIEPTV 304
           S  + GIETSCDDT                 ++  +  + GGI P V    HR+ +   +
Sbjct: 22  SVKVLGIETSCDDTAVAIVNEKREILSSERYTERAIQRQQGGINPSVCALQHRENLPRLI 81

Query: 305 TETLLKANLLMKDISAIAVTVKPGLPLSLAVGMKYAKHLARVNAKPIIPIHHMEAHALTV 484
            + L  A    KD+ A+AVTV PGL ++L  G+  A   A+ +  P+IP+HHM AHAL++
Sbjct: 82  EKCLNDAGTSPKDLDAVAVTVTPGLVIALKEGISAAIGFAKKHRLPLIPVHHMRAHALSI 141

Query: 485 RM-EHNVNFPYLVLLISGGHCLLAVVQNINKFLLLGKSIDMAPGELFDKIARRM 643
            + + +V FP+  +L+SGGH L++V +++ KF L G+S+  +PGE  DK+AR++
Sbjct: 142 LLVDDSVRFPFSAVLLSGGHALISVAEDVEKFKLYGQSVSGSPGECIDKVARQL 195


>AC024859-27|AAK29978.4|  337|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.1 protein.
          Length = 337

 Score = 64.1 bits (149), Expect = 8e-11
 Identities = 44/136 (32%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
 Frame = +2

Query: 248 GIIPDVAQDLHRKYIEPTVTETLLKANLLMKD--ISAIAVTVKPGLPLSLAVGMKYAKHL 421
           G  P      HR+ I   V E +  AN+   +  I  IA T  PG+   L VG   A+ L
Sbjct: 39  GFRPTETAQHHRQQIVRLVGEAIKLANIQNPELEIDGIAYTKGPGMGAPLQVGAIVARTL 98

Query: 422 ARVNAKPIIPIHHMEAHALTVRMEHNVNFPYLVLLISGGHCLLAVVQNINKFLLLGKSID 601
           +    KPIIP++H   H    R+    + P +VL +SGG+  + +     ++ + G++ID
Sbjct: 99  SLTWKKPIIPVNHCVGHIEMGRLITGADNP-VVLYVSGGNTQV-ISYTKKRYRIFGETID 156

Query: 602 MAPGELFDKIARRMKL 649
           +A G   D+ AR +KL
Sbjct: 157 IAVGNCLDRFARVLKL 172


>Z81564-8|CAB04571.1|  140|Caenorhabditis elegans Hypothetical
           protein K05C4.8 protein.
          Length = 140

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 374 GLPLSLAVGMKYAKHLARVNAKPIIPIHHMEAHALTVRMEHNVNFPYL--VLLISGGH 541
           G P+SLAV + +A         P++P+  +  + L +    +++   L  V++I  GH
Sbjct: 32  GSPMSLAVSISWAVGPTCAFNSPMLPVKKLSPNVLILSSSKDISKEVLSNVIVIENGH 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,688,952
Number of Sequences: 27780
Number of extensions: 297731
Number of successful extensions: 700
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)