Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_G13
         (300 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    21   3.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    20   5.7  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    20   5.7  

>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 247 DGEAVEFAVVAGEKGFE 297
           DG+ V    VA E GF+
Sbjct: 81  DGQQVSITYVADENGFQ 97


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 172 TKEDVFVHQTAIARNNPR 225
           +  DV+++Q  ++ NN R
Sbjct: 373 SNNDVYLYQNTMSNNNQR 390


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.2 bits (40), Expect = 5.7
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +1

Query: 172 TKEDVFVHQTAIARNNPR 225
           +  DV+++Q  ++ NN R
Sbjct: 411 SNNDVYLYQNTMSNNNQR 428


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.134    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,402
Number of Sequences: 438
Number of extensions: 873
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6244050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.2 bits)