Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_G06
         (432 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0121 - 20330511-20330707,20332250-20332343                       27   4.9  
12_01_0329 + 2545511-2546683,2546983-2546993,2547377-2547438,254...    27   6.5  
11_04_0349 + 16651344-16651868                                         27   6.5  
03_05_0608 - 26086437-26086892,26091253-26091921                       27   6.5  
05_04_0367 - 20672776-20673550,20674097-20674320,20674626-206748...    27   8.6  

>11_06_0121 - 20330511-20330707,20332250-20332343
          Length = 96

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 349 PRSPPDAKARSILSKGCFSIVPSMGIKKS 263
           PRS P   A  +L+ GC  +  S+G+  S
Sbjct: 64  PRSKPPNYAMGVLNDGCIGVHDSVGVASS 92


>12_01_0329 +
           2545511-2546683,2546983-2546993,2547377-2547438,
           2547882-2548225
          Length = 529

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = +3

Query: 129 ESPAFKYSKHANEQKEHD-KIYEPDYNLY 212
           +SP  K+  H N++KE D   YE +Y+ Y
Sbjct: 340 KSPGAKHHYHTNQKKELDLHDYEAEYDFY 368


>11_04_0349 + 16651344-16651868
          Length = 174

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -3

Query: 355 ASPRSPPDAKARSILSKG 302
           ASPRSPP AK R+++  G
Sbjct: 6   ASPRSPPAAKKRAVVVAG 23


>03_05_0608 - 26086437-26086892,26091253-26091921
          Length = 374

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 306 LLKILLAFASGGLLGDAFLHLIPHA 380
           L  ++ AFASG +L   ++H++P A
Sbjct: 95  LFAVVKAFASGVILATGYMHVLPDA 119


>05_04_0367 -
           20672776-20673550,20674097-20674320,20674626-20674843,
           20675133-20676534
          Length = 872

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 178 CSFCSLACLEYLKAGDSSLCECEC 107
           C   S+     L +G+ S+C CEC
Sbjct: 353 CEIESVGSASVLDSGEESVCSCEC 376


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,809,992
Number of Sequences: 37544
Number of extensions: 193287
Number of successful extensions: 558
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 556
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 814473264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)