Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_G06
         (432 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99942-7|CAB17070.2|  462|Caenorhabditis elegans Hypothetical pr...    73   7e-14
Z82285-8|CAB05297.2|  393|Caenorhabditis elegans Hypothetical pr...    62   2e-10
Z81044-6|CAB02806.1|  360|Caenorhabditis elegans Hypothetical pr...    36   0.017
Z50863-1|CAA90736.3|  353|Caenorhabditis elegans Hypothetical pr...    36   0.017
Z82051-9|CAB04820.1|  350|Caenorhabditis elegans Hypothetical pr...    29   1.1  
Z82051-7|CAB04819.1|  364|Caenorhabditis elegans Hypothetical pr...    29   1.1  
AF016674-1|AAB66132.1|  160|Caenorhabditis elegans Hypothetical ...    27   4.4  
AL031633-19|CAA21031.1|  710|Caenorhabditis elegans Hypothetical...    27   5.8  

>Z99942-7|CAB17070.2|  462|Caenorhabditis elegans Hypothetical
           protein H13N06.5 protein.
          Length = 462

 Score = 73.3 bits (172), Expect = 7e-14
 Identities = 46/115 (40%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
 Frame = +3

Query: 108 HSHSHSDE--SPAFKYSKHANEQKEHDK----IYEPDYNLYVSALCSTXXXXXXXXXXXX 269
           H HSH D   S   + +K   ++ ++      + +    L+V A+ +T            
Sbjct: 118 HGHSHEDHGHSHGAESAKQVGDEYQYTGFLSFLNDAKTRLWVYAISATLLISAAPCFILM 177

Query: 270 XXXXDG-TIEKQPLLKILLAFASGGLLGDAFLHLIPHALMPHNDKQGHSXSHSHS 431
                  T E  PLLK+LLAF SGGLLGDAFLHLIPHA  P  D  GHS SH HS
Sbjct: 178 FIPIQANTSESGPLLKVLLAFGSGGLLGDAFLHLIPHA-TPAGDGHGHSHSHGHS 231


>Z82285-8|CAB05297.2|  393|Caenorhabditis elegans Hypothetical
           protein T28F3.3 protein.
          Length = 393

 Score = 61.7 bits (143), Expect = 2e-10
 Identities = 27/43 (62%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
 Frame = +3

Query: 303 PLLKILLAFASGGLLGDAFLHLIPHALMPHNDKQG-HSXSHSH 428
           P LKILLAF +GGLLGDA LH+IPH+L PH+     H  +HSH
Sbjct: 113 PFLKILLAFGAGGLLGDALLHIIPHSLSPHDHSHDHHDHNHSH 155


>Z81044-6|CAB02806.1|  360|Caenorhabditis elegans Hypothetical
           protein C30H6.2 protein.
          Length = 360

 Score = 35.5 bits (78), Expect = 0.017
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = +3

Query: 297 KQPLLKILLAFASGGLLGDAFLHLIPHALMPHNDKQGHSXSHSH 428
           K   L   LA A   L  DA LH+IP  +  H+    H  SH H
Sbjct: 41  KHRWLHFFLAMAVSTLSSDAILHIIPQVVGVHDHGHNHGHSHEH 84


>Z50863-1|CAA90736.3|  353|Caenorhabditis elegans Hypothetical
           protein C14H10.1 protein.
          Length = 353

 Score = 35.5 bits (78), Expect = 0.017
 Identities = 16/27 (59%), Positives = 18/27 (66%)
 Frame = +3

Query: 300 QPLLKILLAFASGGLLGDAFLHLIPHA 380
           Q  L +LL FA G LL D FLHL+P A
Sbjct: 144 QRRLNLLLGFAIGSLLADVFLHLLPEA 170


>Z82051-9|CAB04820.1|  350|Caenorhabditis elegans Hypothetical
           protein T23D5.12 protein.
          Length = 350

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -2

Query: 320 EYFK*GLLFNCTIYGYKEKYKEWHYTYKQCRTQSTDV*VVIWFINFIMFFLFVGMFGVLK 141
           E  K GL+F C IYG    +    + Y+       D   +IWF  ++M    +  FG+  
Sbjct: 89  EIMKIGLVFFCGIYGSTICFISVQFLYRYWAL--FDAPKLIWFEGWMMSAWLIYSFGIGA 146

Query: 140 SW 135
           +W
Sbjct: 147 TW 148


>Z82051-7|CAB04819.1|  364|Caenorhabditis elegans Hypothetical
           protein T23D5.10 protein.
          Length = 364

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = -2

Query: 320 EYFK*GLLFNCTIYGYKEKYKEWHYTYKQCRTQSTDV*VVIWFINFIMFFLFVGMFGVLK 141
           E  K GL+F C IYG    +    + Y+       D   +IWF  ++M    +  FG+  
Sbjct: 103 EIMKIGLVFFCGIYGSTICFISVQFLYRYWAL--FDAPKLIWFEGWMMSAWLIYSFGIGA 160

Query: 140 SW 135
           +W
Sbjct: 161 TW 162


>AF016674-1|AAB66132.1|  160|Caenorhabditis elegans Hypothetical
           protein C03H5.4 protein.
          Length = 160

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 10/25 (40%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
 Frame = -2

Query: 107 CINYSKCH---N*SKICYTTPYKHF 42
           C N+ KC+   +  K C+TTP+++F
Sbjct: 61  CANHDKCYEDLDLKKTCWTTPFEYF 85


>AL031633-19|CAA21031.1|  710|Caenorhabditis elegans Hypothetical
           protein Y39A1A.22 protein.
          Length = 710

 Score = 27.1 bits (57), Expect = 5.8
 Identities = 9/42 (21%), Positives = 20/42 (47%)
 Frame = -2

Query: 242 YKQCRTQSTDV*VVIWFINFIMFFLFVGMFGVLKSWRFVTMR 117
           Y+     +T +   IW +++IM F +  ++ +   W  +  R
Sbjct: 508 YEATDPNTTSIFFYIWILSYIMSFTYTFLWDIFMDWGLIDPR 549


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,816,278
Number of Sequences: 27780
Number of extensions: 189328
Number of successful extensions: 542
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 538
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)