Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_F24
(535 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 78 5e-15
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 54 5e-08
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 31 0.39
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 31 0.39
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 31 0.39
U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical pr... 31 0.69
AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione ... 31 0.69
Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical pr... 29 2.1
U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormon... 29 2.8
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 28 3.7
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 28 3.7
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 28 3.7
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 28 3.7
AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical ... 28 3.7
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 28 4.8
AF016448-13|AAB65963.1| 239|Caenorhabditis elegans Hypothetical... 28 4.8
Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical pr... 27 6.4
Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical p... 27 6.4
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 77.8 bits (183), Expect = 5e-15
Identities = 54/152 (35%), Positives = 81/152 (53%)
Frame = +3
Query: 51 ENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTES 230
+NFR K LIAA+ + V +A G+ ++ KFP G PAFE G LL +
Sbjct: 10 DNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---GDALLFGA 57
Query: 231 NAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAK 410
+I ++ S A QW +++ LLPA +V P + F+K+ VE+ K
Sbjct: 58 ESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYK 110
Query: 411 SDLLAALKVLDGHLLTRTFLVTERITLADVIV 506
++L L+VLD L+ +T+LV ER++LADV V
Sbjct: 111 NELNGQLQVLDRVLVKKTYLVGERLSLADVSV 142
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 62.5 bits (145), Expect = 2e-10
Identities = 33/94 (35%), Positives = 54/94 (57%)
Frame = +3
Query: 225 ESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVER 404
E +A+ + + L + A QW +++ LLPA +V P + F+K+ VE+
Sbjct: 24 EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 83
Query: 405 AKSDLLAALKVLDGHLLTRTFLVTERITLADVIV 506
K++L L+VLD L+ +T+LV ER++LADV V
Sbjct: 84 YKNELNGQLQVLDRVLVKKTYLVGERLSLADVSV 117
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 54.4 bits (125), Expect = 5e-08
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Frame = +3
Query: 51 ENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTES 230
+NFR K LIAA+ + V +A G+ ++ KFP G PAFE G LL +
Sbjct: 10 DNFRTQKVLIAAKLANKTVTLA-----GDAAPAD----KFPLGVTPAFE---GDALLFGA 57
Query: 231 NAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAK 410
+I ++ S A QW +++ LLPA +V P + F+K+ VE+ K
Sbjct: 58 ESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQYK 110
Query: 411 SDLLAALK-VLDGH 449
++L L+ VLD +
Sbjct: 111 NELNGQLQYVLDAN 124
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.39
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +3
Query: 114 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 293
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 294 RVWQ 305
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 31.5 bits (68), Expect = 0.39
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +3
Query: 114 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 293
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 294 RVWQ 305
++WQ
Sbjct: 1085 QIWQ 1088
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 31.5 bits (68), Expect = 0.39
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +3
Query: 114 APNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQA 293
+P+F+ +++ LK P +P + KVL T + + +Y+ E + LA Q
Sbjct: 1029 SPSFLADADEQTKPLLKPAPPTTLPVGKQEPCKVLPTPNEPVRHYIYQELI----LAVQH 1084
Query: 294 RVWQ 305
++WQ
Sbjct: 1085 QIWQ 1088
>U42833-6|AAA83581.1| 1650|Caenorhabditis elegans Hypothetical
protein ZK430.1 protein.
Length = 1650
Score = 30.7 bits (66), Expect = 0.69
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -2
Query: 264 DFHWQRSKRWHCFQLGALFHRHFRMQALFRQETSSR-SLRTCWSRQIRNSV 115
DF W+RSK W Q ++ R SS+ S+ TC + IR++V
Sbjct: 153 DFDWKRSKEWQFMQQFTKTETPIPFTSIARATLSSKHSIITCITDHIRHAV 203
>AC024200-13|AAF36004.1| 214|Caenorhabditis elegans Glutathione
s-transferase protein43 protein.
Length = 214
Score = 30.7 bits (66), Expect = 0.69
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +3
Query: 63 AYKALIAAQYSGTDVKVAPNFVFGETNKSE-DFLKKFPAGKVPAFESADGKVLLTESNAI 239
A++ IA D + P +F E +K+ +F+K PA KVP + LTES AI
Sbjct: 15 AWRVRIALALKNIDYEYRPIDLFSEESKNNAEFVKHNPAKKVPTL--VINGLSLTESLAI 72
Query: 240 AYYV 251
Y+
Sbjct: 73 IEYL 76
>Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical
protein T24D5.5 protein.
Length = 408
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 255 WQRSKRWHCFQLGALFHRHFRMQALFRQETSSRSLRTCWSRQIRNSV 115
W+R +R H ++G+ RHF+ + + SL CW R + V
Sbjct: 304 WKRYQRKH--KMGSEETRHFKGSSSLSNMNAQSSLMVCWKRSTDDRV 348
>U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 78 protein.
Length = 387
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 312 SWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAAL 431
S+ ++ +L A C W + + + +K+NV + KS L+ L
Sbjct: 298 SFEENAILKALCCWQTAHFKLEECDKENVRKQKSLLVQCL 337
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 28.3 bits (60), Expect = 3.7
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = -3
Query: 308 PLPDTGLGSQISSAETFIGNVVSDGI--AFS*EHFSIGT-FECRHFSGRKLLQEVFGLVG 138
P+ + + +S TF+G VVSDGI S S+ T FE R R++L+ V+
Sbjct: 514 PMNGSTIREDFASESTFLGRVVSDGIMPRISASSNSVLTEFETRF---RRILKRVYR--S 568
Query: 137 LAKYEIR 117
L ++EIR
Sbjct: 569 LQQHEIR 575
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 144 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 251
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 62 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 97
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 28.3 bits (60), Expect = 3.7
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 144 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 251
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 380
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 156 FLKKFPAGKVPAFESADGKVLLTESNAIAYYV 251
+L K P G+VPA E +GKV + ESN I Y+
Sbjct: 138 YLPKSPIGRVPALE-INGKV-VWESNVIVEYL 167
>AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical
protein Y57E12AL.2 protein.
Length = 121
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 354 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTER 482
VF L ++ F +N E+ KS++LAA G TF+ T +
Sbjct: 35 VFALLAVVAFANRNPEQMKSEMLAAGVSAAGVATISTFMETHK 77
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 144 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 251
K + + K G+VP E A+GK L+ ES I Y+
Sbjct: 62 KPDWYFTKNYKGQVPTLEHAEGKKLVIESAVIPEYL 97
>AF016448-13|AAB65963.1| 239|Caenorhabditis elegans Hypothetical
protein F41E6.1 protein.
Length = 239
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 171 ETSSRSLRTCWSRQIRNSVLLSHQSRNIVR 82
ET +R CWSR N+V R++VR
Sbjct: 167 ETGGAIVRDCWSRVFSNAVKNPRARRDVVR 196
>Z35662-1|CAA84721.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +3
Query: 21 GGRGYFTLIXENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFL 161
G +GY I ++ + ++ + S D+ + F N+S DF+
Sbjct: 156 GEQGYEAEIDDDLEPFSTVLRVEASDADIGINSAIYFSLVNRSHDFI 202
>Z35599-4|CAA84661.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +3
Query: 21 GGRGYFTLIXENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFL 161
G +GY I ++ + ++ + S D+ + F N+S DF+
Sbjct: 156 GEQGYEAEIDDDLEPFSTVLRVEASDADIGINSAIYFSLVNRSHDFI 202
>Z34802-10|CAA84339.1| 4307|Caenorhabditis elegans Hypothetical
protein F25F2.2 protein.
Length = 4307
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/47 (23%), Positives = 22/47 (46%)
Frame = +3
Query: 21 GGRGYFTLIXENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFL 161
G +GY I ++ + ++ + S D+ + F N+S DF+
Sbjct: 156 GEQGYEAEIDDDLEPFSTVLRVEASDADIGINSAIYFSLVNRSHDFI 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,320,416
Number of Sequences: 27780
Number of extensions: 291016
Number of successful extensions: 754
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -