Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_F23
(489 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087079-2|AAK27863.1| 67|Caenorhabditis elegans Hypothetical ... 132 2e-31
Z81477-8|CAC70076.1| 739|Caenorhabditis elegans Hypothetical pr... 28 3.2
AL117201-6|CAB55065.2| 739|Caenorhabditis elegans Hypothetical ... 28 3.2
Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical pr... 27 7.3
AF016684-10|AAB66205.1| 340|Caenorhabditis elegans Hypothetical... 27 7.3
Z70754-10|CAA94779.2| 273|Caenorhabditis elegans Hypothetical p... 27 9.7
Z70753-13|CAA94770.2| 273|Caenorhabditis elegans Hypothetical p... 27 9.7
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 27 9.7
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 27 9.7
AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel... 27 9.7
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 27 9.7
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 27 9.7
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 27 9.7
>AC087079-2|AAK27863.1| 67|Caenorhabditis elegans Hypothetical
protein Y37E3.3 protein.
Length = 67
Score = 132 bits (318), Expect = 2e-31
Identities = 56/67 (83%), Positives = 62/67 (92%)
Frame = +2
Query: 251 MIIPVRCFTCGKVIGNKWEAYLGLLQADYTEGDALDVLGLKRYCCRRMLLGHVDLIEKLL 430
MIIP+RCFTCGKVIG+KWE YLG LQ++Y+EGDALD LGL+RYCCRRMLL HVDLIEKLL
Sbjct: 1 MIIPIRCFTCGKVIGDKWETYLGFLQSEYSEGDALDALGLRRYCCRRMLLAHVDLIEKLL 60
Query: 431 NYSPLEK 451
NY PLEK
Sbjct: 61 NYHPLEK 67
>Z81477-8|CAC70076.1| 739|Caenorhabditis elegans Hypothetical
protein Y53H1C.3 protein.
Length = 739
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 159 FTFNNNRRYFSYKASLNLMRKHCNSILYNSQ*Y-YFTSR*KLFRLATTVID 10
F N Y YKASL++ K + +YNS F + +F+ +T+ +D
Sbjct: 440 FNCLQNNAYLKYKASLSIATKRISDHVYNSTYQNSFNNLLGVFKNSTSAVD 490
>AL117201-6|CAB55065.2| 739|Caenorhabditis elegans Hypothetical
protein Y53H1C.3 protein.
Length = 739
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = -1
Query: 159 FTFNNNRRYFSYKASLNLMRKHCNSILYNSQ*Y-YFTSR*KLFRLATTVID 10
F N Y YKASL++ K + +YNS F + +F+ +T+ +D
Sbjct: 440 FNCLQNNAYLKYKASLSIATKRISDHVYNSTYQNSFNNLLGVFKNSTSAVD 490
>Z74026-1|CAD56284.1| 1093|Caenorhabditis elegans Hypothetical
protein B0240.3 protein.
Length = 1093
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 181 IVKALILYNPSASPQL*VVGNKQNDYSSTMFHM 279
I A+ ++ PSA L +GNK NDY+ M M
Sbjct: 113 ISDAITIFEPSARVILLFLGNKLNDYTEFMTAM 145
>Z78419-6|CAB01704.1| 487|Caenorhabditis elegans Hypothetical
protein F26A3.6 protein.
Length = 487
Score = 27.1 bits (57), Expect = 7.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 255 IILFISYNLKLW*GTGVIKYQCFNYLFGL 169
++ FI YN+ LW G I + F Y GL
Sbjct: 417 LLSFIGYNMALWFTVGHILWSMFWYATGL 445
>AF016684-10|AAB66205.1| 340|Caenorhabditis elegans Hypothetical
protein F45C12.6 protein.
Length = 340
Score = 27.1 bits (57), Expect = 7.3
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 162 VFTFNNNRRYFSYKASLNLMRKHCNSILY 76
VF N + Y SY+ SL + R HC LY
Sbjct: 100 VFDTNFHVMYTSYRYSLTIHRSHCLHRLY 128
>Z70754-10|CAA94779.2| 273|Caenorhabditis elegans Hypothetical
protein F40F9.9 protein.
Length = 273
Score = 26.6 bits (56), Expect = 9.7
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 265 YWNNHFVYFLQP 230
YWNNH++Y+ P
Sbjct: 239 YWNNHYIYWAGP 250
>Z70753-13|CAA94770.2| 273|Caenorhabditis elegans Hypothetical
protein F40F9.9 protein.
Length = 273
Score = 26.6 bits (56), Expect = 9.7
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 265 YWNNHFVYFLQP 230
YWNNH++Y+ P
Sbjct: 239 YWNNHYIYWAGP 250
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 26.6 bits (56), Expect = 9.7
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = -1
Query: 303 HLFPITFPHVKHRTGIIILFISYNLKLW*GTGVIKYQCFNYLFGL*NVFTFNNNRRYFSY 124
+LF + F + II + Y + + G+ K++ L N F R YF+Y
Sbjct: 435 YLFEVGFT-ILFNVECIIKILCYGFRNFIRRGIFKFELILCLGSSLNCVKFFYERNYFTY 493
Query: 123 KASLNLMR 100
+ L+R
Sbjct: 494 FQTFRLLR 501
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 26.6 bits (56), Expect = 9.7
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = -1
Query: 303 HLFPITFPHVKHRTGIIILFISYNLKLW*GTGVIKYQCFNYLFGL*NVFTFNNNRRYFSY 124
+LF + F + II + Y + + G+ K++ L N F R YF+Y
Sbjct: 435 YLFEVGFT-ILFNVECIIKILCYGFRNFIRRGIFKFELILCLGSSLNCVKFFYERNYFTY 493
Query: 123 KASLNLMR 100
+ L+R
Sbjct: 494 FQTFRLLR 501
>AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
b protein.
Length = 978
Score = 26.6 bits (56), Expect = 9.7
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = -1
Query: 303 HLFPITFPHVKHRTGIIILFISYNLKLW*GTGVIKYQCFNYLFGL*NVFTFNNNRRYFSY 124
+LF + F + II + Y + + G+ K++ L N F R YF+Y
Sbjct: 493 YLFEVGFT-ILFNVECIIKILCYGFRNFIRRGIFKFELILCLGSSLNCVKFFYERNYFTY 551
Query: 123 KASLNLMR 100
+ L+R
Sbjct: 552 FQTFRLLR 559
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 26.6 bits (56), Expect = 9.7
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = -1
Query: 303 HLFPITFPHVKHRTGIIILFISYNLKLW*GTGVIKYQCFNYLFGL*NVFTFNNNRRYFSY 124
+LF + F + II + Y + + G+ K++ L N F R YF+Y
Sbjct: 493 YLFEVGFT-ILFNVECIIKILCYGFRNFIRRGIFKFELILCLGSSLNCVKFFYERNYFTY 551
Query: 123 KASLNLMR 100
+ L+R
Sbjct: 552 FQTFRLLR 559
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 26.6 bits (56), Expect = 9.7
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = -1
Query: 303 HLFPITFPHVKHRTGIIILFISYNLKLW*GTGVIKYQCFNYLFGL*NVFTFNNNRRYFSY 124
+LF + F + II + Y + + G+ K++ L N F R YF+Y
Sbjct: 539 YLFEVGFT-ILFNVECIIKILCYGFRNFIRRGIFKFELILCLGSSLNCVKFFYERNYFTY 597
Query: 123 KASLNLMR 100
+ L+R
Sbjct: 598 FQTFRLLR 605
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 26.6 bits (56), Expect = 9.7
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = -1
Query: 303 HLFPITFPHVKHRTGIIILFISYNLKLW*GTGVIKYQCFNYLFGL*NVFTFNNNRRYFSY 124
+LF + F + II + Y + + G+ K++ L N F R YF+Y
Sbjct: 465 YLFEVGFT-ILFNVECIIKILCYGFRNFIRRGIFKFELILCLGSSLNCVKFFYERNYFTY 523
Query: 123 KASLNLMR 100
+ L+R
Sbjct: 524 FQTFRLLR 531
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,026,704
Number of Sequences: 27780
Number of extensions: 223631
Number of successful extensions: 468
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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