Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_F14
         (369 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0350 + 16899076-16900164                                         29   0.86 
01_06_1281 - 35966121-35966392,35966406-35966574,35966607-35966918     28   2.6  
06_01_0900 + 6926600-6927202                                           27   4.6  
11_08_0019 + 27697918-27698609,27701107-27701372,27701778-277019...    27   6.1  
03_04_0020 - 16504322-16504654,16504758-16504785,16504937-165049...    27   6.1  
04_04_1105 - 30942735-30942791,30943116-30943466,30943670-309437...    26   8.1  

>09_04_0350 + 16899076-16900164
          Length = 362

 Score = 29.5 bits (63), Expect = 0.86
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 229 HSQWQRLVGCRKWRQWQRALRRTRFDHHMQH 137
           H +W++  GC +WR+   A+   R   H +H
Sbjct: 252 HGEWRQRSGCWQWRRLTEAVAGGRDSSHRRH 282


>01_06_1281 - 35966121-35966392,35966406-35966574,35966607-35966918
          Length = 250

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 223 QWQRLVGCRKWRQWQRALRRTR 158
           +W R+ G R+W +W+R+ R  R
Sbjct: 144 RWSRMAGRRRWLKWRRSGRCQR 165


>06_01_0900 + 6926600-6927202
          Length = 200

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -3

Query: 256 WQPQLDMLYH-SQWQRLVGCRKWRQWQRALRRTRFDHH 146
           W+  +D L    +W  LV   +W+ + R  RR+   HH
Sbjct: 66  WRRGVDALMKVREWSELVAGPRWKTFIRRFRRSPRHHH 103


>11_08_0019 +
           27697918-27698609,27701107-27701372,27701778-27701948,
           27702187-27703166,27703723-27703804,27704148-27704170
          Length = 737

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 135 SCSRAVLGSSVSEPKIIICSHHLPIFRVETIKTLQQERP 19
           S +R +L   ++ P+++ C H +    V+++K    ERP
Sbjct: 654 SQAREMLDDDITSPEVMDCLHMIGRIAVQSLKEDVDERP 692


>03_04_0020 -
           16504322-16504654,16504758-16504785,16504937-16504989,
           16505377-16505463,16505636-16505704,16506071-16506145,
           16507040-16507210,16507693-16507793,16508062-16508139,
           16508492-16508648,16508737-16509006,16509369-16509485,
           16510250-16510339,16510417-16510629,16510742-16510891,
           16511929-16512342
          Length = 801

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 147 WWSNRVRRSARCHCR 191
           WW + + RS  CHCR
Sbjct: 116 WWVHCLTRSCDCHCR 130


>04_04_1105 -
           30942735-30942791,30943116-30943466,30943670-30943762,
           30943869-30944072,30944155-30944399,30945019-30945877,
           30946070-30946936,30947113-30947562
          Length = 1041

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 196 KWRQWQRALRRTRFDHHM 143
           KWR W+  L+R  +D H+
Sbjct: 827 KWRNWRCNLKRKHYDSHI 844


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,724,029
Number of Sequences: 37544
Number of extensions: 100066
Number of successful extensions: 335
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 335
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)