Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_F14
         (369 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81545-2|CAB04438.1|  212|Caenorhabditis elegans Hypothetical pr...    26   9.7  
AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical ...    26   9.7  

>Z81545-2|CAB04438.1|  212|Caenorhabditis elegans Hypothetical
          protein F49H6.2 protein.
          Length = 212

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 84 ICSHHLPIFRV 52
          IC HHLPIF++
Sbjct: 33 ICDHHLPIFQI 43


>AL132853-9|CAB60444.4| 1467|Caenorhabditis elegans Hypothetical
            protein Y80D3A.2 protein.
          Length = 1467

 Score = 25.8 bits (54), Expect = 9.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 368  LLSGRQQLXVGNTHSCWRHM 309
            L SG     +   HSCWRH+
Sbjct: 984  LFSGNNSADLKVAHSCWRHI 1003


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,625,882
Number of Sequences: 27780
Number of extensions: 82873
Number of successful extensions: 226
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 524900642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)