Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_F13
         (576 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0456 + 3522599-3523921,3524005-3524027,3524097-3525265,352...    31   0.50 
04_03_0047 + 10118929-10119276                                         29   2.0  
11_03_0158 + 10911997-10912078,10912203-10912288,10913780-109138...    29   2.7  
04_04_1560 - 34432491-34432837,34433097-34433292                       29   3.5  
02_03_0296 + 17393706-17394052,17394278-17394388,17395507-17395687     27   8.1  
02_01_0385 + 2783387-2783695,2784149-2785082,2785206-2785309,278...    27   8.1  

>11_01_0456 +
           3522599-3523921,3524005-3524027,3524097-3525265,
           3525373-3525737
          Length = 959

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/38 (44%), Positives = 26/38 (68%)
 Frame = +3

Query: 66  ILVNVGTVVSLQNIISNQILFLFHSQRQRK*LSVPSYG 179
           IL+ V  +VSL  +IS  I F +  +R+R+ LS+PS+G
Sbjct: 596 ILIPVACLVSLAMVIS--IFFTWRGKRKRESLSLPSFG 631


>04_03_0047 + 10118929-10119276
          Length = 115

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 432 ILTTVTVLPLHLQEFNQHLPRRLVHPEWSLPPLNSSYL 545
           I T+V V  + L   +Q LP   +HP + +PPL +S L
Sbjct: 63  ITTSVVVAAIFLSSCHQPLPSA-IHPSYRMPPLPTSPL 99


>11_03_0158 +
           10911997-10912078,10912203-10912288,10913780-10913857,
           10913967-10914098,10914385-10914435,10914529-10914669,
           10914754-10914876,10914989-10915066,10915448-10915541,
           10915633-10915739,10915936-10916019,10916649-10916744,
           10916835-10917023,10917705-10917780,10918507-10918610,
           10918708-10918967,10920000-10920086,10920184-10920411,
           10920752-10920826,10921264-10921346,10921552-10921661
          Length = 787

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +3

Query: 459 LHLQEFNQHLPRRLVHPEWSLPPLNSSYLYYKHRVVIXH 575
           LHL+     +  +LVHP   LP + S  L ++ ++ + H
Sbjct: 554 LHLKNVPTEIASKLVHPSRRLPVVVSGLLQHESKISVLH 592


>04_04_1560 - 34432491-34432837,34433097-34433292
          Length = 180

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 18/46 (39%), Positives = 21/46 (45%)
 Frame = +2

Query: 410 DAAKPAHNPHDRDGAPPTPPRI*STLAEATCSSRVVVATFEFQLFV 547
           DA  PA  P     APPTPP   S  A A  +  + VA     +FV
Sbjct: 133 DAPPPASPPPPPSNAPPTPPHP-SGAASALGAGGLAVAAMLLPVFV 177


>02_03_0296 + 17393706-17394052,17394278-17394388,17395507-17395687
          Length = 212

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +3

Query: 465 LQEFNQHLPRRLVHPEWSLPP-LNSSYLYYKHRVVI 569
           LQ FN H  RRL H    +P  L S   +  H  +I
Sbjct: 155 LQRFNAHARRRLKHTSRCMPARLRSQAFHQSHMAII 190


>02_01_0385 + 2783387-2783695,2784149-2785082,2785206-2785309,
            2785402-2785486,2785517-2787578,2787732-2787753,
            2788157-2788327,2791473-2791517,2792558-2793874,
            2793962-2794012,2794090-2794188,2794352-2794504,
            2794554-2794571
          Length = 1789

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = -2

Query: 455  EHRHGREDCALVWPHLGSGCVAGASYT*LTQMPSSRTS 342
            +H H   DC  V   L SGC +G+ Y+        RTS
Sbjct: 1476 QHGHNNLDCTSVPNFLPSGCSSGSVYSRRFDAMRKRTS 1513


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,772,798
Number of Sequences: 37544
Number of extensions: 324631
Number of successful extensions: 1020
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)