Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_F13
         (576 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    26   1.0  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   1.3  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   2.3  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    23   9.4  

>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
            gambiae RT2 retroposon. ).
          Length = 1222

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +2

Query: 392  RRNQIQDAAKPAHNPHDRDGAPPTPP 469
            RRN  + AA        R G PPTPP
Sbjct: 1110 RRNANRRAATARRREERRAGLPPTPP 1135


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 392  RRNQIQDAAKPAHNPHDRDGAPPTPP 469
            RRN  + AA+       R G PP+PP
Sbjct: 1047 RRNASRRAARARQRELQRAGRPPSPP 1072


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 274  ESECLEQLPXXSAAGVGWQQL 336
            + +CLE+L     AG GW++L
Sbjct: 1050 DEQCLEELCRLLDAGSGWREL 1070


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +3

Query: 432 ILTTVTVLPLHLQEFNQHLPRRLVHPEWSLPPLNSSYLYY 551
           ILT + ++ + L      + R+L+H + +LP L   Y+ Y
Sbjct: 161 ILTGIWIISIVLAS-PMFIIRQLIHYDVNLPSLGIEYVSY 199


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,084
Number of Sequences: 2352
Number of extensions: 12839
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)