Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_F13
         (576 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113320-1|AAM29325.1|  110|Drosophila melanogaster AT28250p pro...    53   2e-07
AE013599-3894|AAM68318.1|  110|Drosophila melanogaster CG13585-P...    53   2e-07
AE013599-3893|AAF47223.1|  110|Drosophila melanogaster CG13585-P...    53   2e-07
BT003502-1|AAO39506.1| 1028|Drosophila melanogaster RE41896p pro...    29   6.0  
AE013599-668|AAF59075.1|  952|Drosophila melanogaster CG14748-PA...    29   6.0  

>AY113320-1|AAM29325.1|  110|Drosophila melanogaster AT28250p
           protein.
          Length = 110

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = +1

Query: 175 MGDEMDPCECLWNHELAMRRLISLLRQGQSYCTESECLE 291
           M D+ D CEC+W+ E AM+RLI+ +RQ Q+ C ++EC +
Sbjct: 1   MSDDFDGCECVWSQEYAMQRLINFIRQNQNACGDNECYD 39


>AE013599-3894|AAM68318.1|  110|Drosophila melanogaster CG13585-PB,
           isoform B protein.
          Length = 110

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = +1

Query: 175 MGDEMDPCECLWNHELAMRRLISLLRQGQSYCTESECLE 291
           M D+ D CEC+W+ E AM+RLI+ +RQ Q+ C ++EC +
Sbjct: 1   MSDDFDGCECVWSQEYAMQRLINFIRQNQNACGDNECYD 39


>AE013599-3893|AAF47223.1|  110|Drosophila melanogaster CG13585-PA,
           isoform A protein.
          Length = 110

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = +1

Query: 175 MGDEMDPCECLWNHELAMRRLISLLRQGQSYCTESECLE 291
           M D+ D CEC+W+ E AM+RLI+ +RQ Q+ C ++EC +
Sbjct: 1   MSDDFDGCECVWSQEYAMQRLINFIRQNQNACGDNECYD 39


>BT003502-1|AAO39506.1| 1028|Drosophila melanogaster RE41896p
           protein.
          Length = 1028

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = +2

Query: 416 AKPAHNPHDRDGA-PPTPP 469
           ++P+HN  DRDGA PP PP
Sbjct: 402 SRPSHNYLDRDGAGPPGPP 420


>AE013599-668|AAF59075.1|  952|Drosophila melanogaster CG14748-PA
           protein.
          Length = 952

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/19 (63%), Positives = 15/19 (78%), Gaps = 1/19 (5%)
 Frame = +2

Query: 416 AKPAHNPHDRDGA-PPTPP 469
           ++P+HN  DRDGA PP PP
Sbjct: 326 SRPSHNYLDRDGAGPPGPP 344


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,707,134
Number of Sequences: 53049
Number of extensions: 524638
Number of successful extensions: 1638
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1638
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)