Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_F04
(645 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089558-1|AAL90296.1| 1063|Drosophila melanogaster LD45706p pro... 274 9e-74
AJ249178-1|CAB53566.1| 1063|Drosophila melanogaster chromosomal ... 274 9e-74
AF190557-1|AAF01341.1| 1063|Drosophila melanogaster chromosomal ... 274 9e-74
AF179361-2|AAD55780.1| 1063|Drosophila melanogaster embargoed pr... 274 9e-74
AF179360-1|AAD55778.1| 1063|Drosophila melanogaster embargoed pr... 274 9e-74
AE014134-1501|AAG22423.2| 1063|Drosophila melanogaster CG13387-P... 274 9e-74
AY061428-1|AAL28976.1| 971|Drosophila melanogaster LD35896p pro... 46 4e-05
AE014297-2451|AAF55502.1| 971|Drosophila melanogaster CG7212-PA... 46 4e-05
DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234 prot... 46 6e-05
AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p pro... 46 6e-05
AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21 prot... 46 6e-05
AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-P... 46 6e-05
AY069790-1|AAL39935.1| 1047|Drosophila melanogaster SD03282p pro... 35 0.082
AL009188-3|CAA15674.2| 1060|Drosophila melanogaster EG:165H7.3 p... 35 0.082
AE014298-33|AAF45504.2| 1047|Drosophila melanogaster CG3923-PA p... 35 0.11
BT003467-1|AAO39470.1| 640|Drosophila melanogaster RE70810p pro... 31 1.8
AE014296-2127|AAF49930.2| 640|Drosophila melanogaster CG32105-P... 31 1.8
AE014297-4736|AAF57144.1| 526|Drosophila melanogaster CG11340-P... 29 5.4
BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p pro... 28 9.4
AY069185-1|AAL39330.1| 1385|Drosophila melanogaster GH23617p pro... 28 9.4
AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-P... 28 9.4
AE014296-2853|AAF49385.1| 1385|Drosophila melanogaster CG3764-PA... 28 9.4
>AY089558-1|AAL90296.1| 1063|Drosophila melanogaster LD45706p
protein.
Length = 1063
Score = 274 bits (671), Expect = 9e-74
Identities = 127/165 (76%), Positives = 143/165 (86%), Gaps = 2/165 (1%)
Frame = +3
Query: 153 MATL--EQQASKLLDFNQKLDINLLDNIVGCLYSAVGDQQRVAQDILTALKEHPDAWTRV 326
MAT+ +A KLLDF+QKLDINLLD IV +Y+A G+Q R+AQ ILT LKEHP+AWTRV
Sbjct: 1 MATMLTSDEAGKLLDFSQKLDINLLDKIVEVVYTAQGEQLRLAQSILTTLKEHPEAWTRV 60
Query: 327 DTILEYSQNQETKYYALQILEQVILTRWKILPRNQCEGIKKYIVGLIIKNSSDPVTMESN 506
D+ILEYSQNQ TK+YALQILE+VI TRWK+LPRNQCEGIKKY+V LIIK SSDP+ ME N
Sbjct: 61 DSILEYSQNQRTKFYALQILEEVIKTRWKVLPRNQCEGIKKYVVSLIIKTSSDPIVMEQN 120
Query: 507 KVYLKKLNMILIQVLKREWPHNWETFISDIVGASKTNESLCQNNM 641
KVYL KLNMIL+ +LKREWP NWETFISDIVGASKTNESLC NNM
Sbjct: 121 KVYLNKLNMILVHILKREWPRNWETFISDIVGASKTNESLCMNNM 165
>AJ249178-1|CAB53566.1| 1063|Drosophila melanogaster chromosomal
region maintenance1 protein protein.
Length = 1063
Score = 274 bits (671), Expect = 9e-74
Identities = 127/165 (76%), Positives = 143/165 (86%), Gaps = 2/165 (1%)
Frame = +3
Query: 153 MATL--EQQASKLLDFNQKLDINLLDNIVGCLYSAVGDQQRVAQDILTALKEHPDAWTRV 326
MAT+ +A KLLDF+QKLDINLLD IV +Y+A G+Q R+AQ ILT LKEHP+AWTRV
Sbjct: 1 MATMLTSDEAGKLLDFSQKLDINLLDKIVEVVYTAQGEQLRLAQSILTTLKEHPEAWTRV 60
Query: 327 DTILEYSQNQETKYYALQILEQVILTRWKILPRNQCEGIKKYIVGLIIKNSSDPVTMESN 506
D+ILEYSQNQ TK+YALQILE+VI TRWK+LPRNQCEGIKKY+V LIIK SSDP+ ME N
Sbjct: 61 DSILEYSQNQRTKFYALQILEEVIKTRWKVLPRNQCEGIKKYVVSLIIKTSSDPIVMEQN 120
Query: 507 KVYLKKLNMILIQVLKREWPHNWETFISDIVGASKTNESLCQNNM 641
KVYL KLNMIL+ +LKREWP NWETFISDIVGASKTNESLC NNM
Sbjct: 121 KVYLNKLNMILVHILKREWPRNWETFISDIVGASKTNESLCMNNM 165
>AF190557-1|AAF01341.1| 1063|Drosophila melanogaster chromosomal
region maintenanceprotein CRM1 protein.
Length = 1063
Score = 274 bits (671), Expect = 9e-74
Identities = 127/165 (76%), Positives = 143/165 (86%), Gaps = 2/165 (1%)
Frame = +3
Query: 153 MATL--EQQASKLLDFNQKLDINLLDNIVGCLYSAVGDQQRVAQDILTALKEHPDAWTRV 326
MAT+ +A KLLDF+QKLDINLLD IV +Y+A G+Q R+AQ ILT LKEHP+AWTRV
Sbjct: 1 MATMLTSDEAGKLLDFSQKLDINLLDKIVEVVYTAQGEQLRLAQSILTTLKEHPEAWTRV 60
Query: 327 DTILEYSQNQETKYYALQILEQVILTRWKILPRNQCEGIKKYIVGLIIKNSSDPVTMESN 506
D+ILEYSQNQ TK+YALQILE+VI TRWK+LPRNQCEGIKKY+V LIIK SSDP+ ME N
Sbjct: 61 DSILEYSQNQRTKFYALQILEEVIKTRWKVLPRNQCEGIKKYVVSLIIKTSSDPIVMEQN 120
Query: 507 KVYLKKLNMILIQVLKREWPHNWETFISDIVGASKTNESLCQNNM 641
KVYL KLNMIL+ +LKREWP NWETFISDIVGASKTNESLC NNM
Sbjct: 121 KVYLNKLNMILVHILKREWPRNWETFISDIVGASKTNESLCMNNM 165
>AF179361-2|AAD55780.1| 1063|Drosophila melanogaster embargoed
protein.
Length = 1063
Score = 274 bits (671), Expect = 9e-74
Identities = 127/165 (76%), Positives = 143/165 (86%), Gaps = 2/165 (1%)
Frame = +3
Query: 153 MATL--EQQASKLLDFNQKLDINLLDNIVGCLYSAVGDQQRVAQDILTALKEHPDAWTRV 326
MAT+ +A KLLDF+QKLDINLLD IV +Y+A G+Q R+AQ ILT LKEHP+AWTRV
Sbjct: 1 MATMLTSDEAGKLLDFSQKLDINLLDKIVEVVYTAQGEQLRLAQSILTTLKEHPEAWTRV 60
Query: 327 DTILEYSQNQETKYYALQILEQVILTRWKILPRNQCEGIKKYIVGLIIKNSSDPVTMESN 506
D+ILEYSQNQ TK+YALQILE+VI TRWK+LPRNQCEGIKKY+V LIIK SSDP+ ME N
Sbjct: 61 DSILEYSQNQRTKFYALQILEEVIKTRWKVLPRNQCEGIKKYVVSLIIKTSSDPIVMEQN 120
Query: 507 KVYLKKLNMILIQVLKREWPHNWETFISDIVGASKTNESLCQNNM 641
KVYL KLNMIL+ +LKREWP NWETFISDIVGASKTNESLC NNM
Sbjct: 121 KVYLNKLNMILVHILKREWPRNWETFISDIVGASKTNESLCMNNM 165
>AF179360-1|AAD55778.1| 1063|Drosophila melanogaster embargoed
protein.
Length = 1063
Score = 274 bits (671), Expect = 9e-74
Identities = 127/165 (76%), Positives = 143/165 (86%), Gaps = 2/165 (1%)
Frame = +3
Query: 153 MATL--EQQASKLLDFNQKLDINLLDNIVGCLYSAVGDQQRVAQDILTALKEHPDAWTRV 326
MAT+ +A KLLDF+QKLDINLLD IV +Y+A G+Q R+AQ ILT LKEHP+AWTRV
Sbjct: 1 MATMLTSDEAGKLLDFSQKLDINLLDKIVEVVYTAQGEQLRLAQSILTTLKEHPEAWTRV 60
Query: 327 DTILEYSQNQETKYYALQILEQVILTRWKILPRNQCEGIKKYIVGLIIKNSSDPVTMESN 506
D+ILEYSQNQ TK+YALQILE+VI TRWK+LPRNQCEGIKKY+V LIIK SSDP+ ME N
Sbjct: 61 DSILEYSQNQRTKFYALQILEEVIKTRWKVLPRNQCEGIKKYVVSLIIKTSSDPIVMEQN 120
Query: 507 KVYLKKLNMILIQVLKREWPHNWETFISDIVGASKTNESLCQNNM 641
KVYL KLNMIL+ +LKREWP NWETFISDIVGASKTNESLC NNM
Sbjct: 121 KVYLNKLNMILVHILKREWPRNWETFISDIVGASKTNESLCMNNM 165
>AE014134-1501|AAG22423.2| 1063|Drosophila melanogaster CG13387-PA
protein.
Length = 1063
Score = 274 bits (671), Expect = 9e-74
Identities = 127/165 (76%), Positives = 143/165 (86%), Gaps = 2/165 (1%)
Frame = +3
Query: 153 MATL--EQQASKLLDFNQKLDINLLDNIVGCLYSAVGDQQRVAQDILTALKEHPDAWTRV 326
MAT+ +A KLLDF+QKLDINLLD IV +Y+A G+Q R+AQ ILT LKEHP+AWTRV
Sbjct: 1 MATMLTSDEAGKLLDFSQKLDINLLDKIVEVVYTAQGEQLRLAQSILTTLKEHPEAWTRV 60
Query: 327 DTILEYSQNQETKYYALQILEQVILTRWKILPRNQCEGIKKYIVGLIIKNSSDPVTMESN 506
D+ILEYSQNQ TK+YALQILE+VI TRWK+LPRNQCEGIKKY+V LIIK SSDP+ ME N
Sbjct: 61 DSILEYSQNQRTKFYALQILEEVIKTRWKVLPRNQCEGIKKYVVSLIIKTSSDPIVMEQN 120
Query: 507 KVYLKKLNMILIQVLKREWPHNWETFISDIVGASKTNESLCQNNM 641
KVYL KLNMIL+ +LKREWP NWETFISDIVGASKTNESLC NNM
Sbjct: 121 KVYLNKLNMILVHILKREWPRNWETFISDIVGASKTNESLCMNNM 165
>AY061428-1|AAL28976.1| 971|Drosophila melanogaster LD35896p
protein.
Length = 971
Score = 46.0 bits (104), Expect = 4e-05
Identities = 31/142 (21%), Positives = 63/142 (44%)
Frame = +3
Query: 198 QKLDINLLDNIVGCLYSAVGDQQRVAQDILTALKEHPDAWTRVDTILEYSQNQETKYYAL 377
+ +DI L+ V Y + Q + + LT + P AW +++ ++QE +++
Sbjct: 2 EPIDIARLEEAVVSFYRSNSQNQAITHEWLTDAEASPQAWQFSWQLMQLGKSQEVQFFGA 61
Query: 378 QILEQVILTRWKILPRNQCEGIKKYIVGLIIKNSSDPVTMESNKVYLKKLNMILIQVLKR 557
L ++ W +P E +K+ I+ I++ + P + N++ + L ++ +L
Sbjct: 62 ITLHSKLMKHWHEVPPENREELKQKILESIVRFAGGP-KIVLNRLCI-SLGAYIVHML-G 118
Query: 558 EWPHNWETFISDIVGASKTNES 623
EWP E I+ N S
Sbjct: 119 EWPGAIEEVINTFQNQRMPNVS 140
>AE014297-2451|AAF55502.1| 971|Drosophila melanogaster CG7212-PA
protein.
Length = 971
Score = 46.0 bits (104), Expect = 4e-05
Identities = 31/142 (21%), Positives = 63/142 (44%)
Frame = +3
Query: 198 QKLDINLLDNIVGCLYSAVGDQQRVAQDILTALKEHPDAWTRVDTILEYSQNQETKYYAL 377
+ +DI L+ V Y + Q + + LT + P AW +++ ++QE +++
Sbjct: 2 EPIDIARLEEAVVSFYRSNSQNQAITHEWLTDAEASPQAWQFSWQLMQLGKSQEVQFFGA 61
Query: 378 QILEQVILTRWKILPRNQCEGIKKYIVGLIIKNSSDPVTMESNKVYLKKLNMILIQVLKR 557
L ++ W +P E +K+ I+ I++ + P + N++ + L ++ +L
Sbjct: 62 ITLHSKLMKHWHEVPPENREELKQKILESIVRFAGGP-KIVLNRLCI-SLGAYIVHML-G 118
Query: 558 EWPHNWETFISDIVGASKTNES 623
EWP E I+ N S
Sbjct: 119 EWPGAIEEVINTFQNQRMPNVS 140
>DQ138872-1|ABA86478.1| 1228|Drosophila melanogaster CG12234
protein.
Length = 1228
Score = 45.6 bits (103), Expect = 6e-05
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +3
Query: 351 NQETKYYALQILEQVILTRWKILPRNQCEGIKKYIVGLIIKNSSDPVTMESNKVYLKKLN 530
NQ+ +++ LQ++E I RW + + IK + ++ P S L+
Sbjct: 55 NQQVRHFGLQLIEYTIKYRWNCITHEEKVYIKDNAIKML-NVGVGPAEDRSLLPTKDALS 113
Query: 531 MILIQVLKREWPHNWETFISDIVGASKTNES 623
I+++++KREWP W + ++ A E+
Sbjct: 114 RIIVEMIKREWPQQWSDLLPELSQACTKGEA 144
>AY118535-1|AAM49904.1| 1241|Drosophila melanogaster LD26789p
protein.
Length = 1241
Score = 45.6 bits (103), Expect = 6e-05
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +3
Query: 351 NQETKYYALQILEQVILTRWKILPRNQCEGIKKYIVGLIIKNSSDPVTMESNKVYLKKLN 530
NQ+ +++ LQ++E I RW + + IK + ++ P S L+
Sbjct: 62 NQQVRHFGLQLIEYTIKYRWNCITHEEKVYIKDNAIKML-NVGVGPAEDRSLLPTKDALS 120
Query: 531 MILIQVLKREWPHNWETFISDIVGASKTNES 623
I+++++KREWP W + ++ A E+
Sbjct: 121 RIIVEMIKREWPQQWSDLLPELSQACTKGEA 151
>AF222746-1|AAG53520.1| 1241|Drosophila melanogaster RanBP21
protein.
Length = 1241
Score = 45.6 bits (103), Expect = 6e-05
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +3
Query: 351 NQETKYYALQILEQVILTRWKILPRNQCEGIKKYIVGLIIKNSSDPVTMESNKVYLKKLN 530
NQ+ +++ LQ++E I RW + + IK + ++ P S L+
Sbjct: 62 NQQVRHFGLQLIEYTIKYRWNCITHEEKVYIKDNAIKML-NVGVGPAEDRSLLPTKDALS 120
Query: 531 MILIQVLKREWPHNWETFISDIVGASKTNES 623
I+++++KREWP W + ++ A E+
Sbjct: 121 RIIVEMIKREWPQQWSDLLPELSQACTKGEA 151
>AE014298-2905|AAF48995.1| 1241|Drosophila melanogaster CG12234-PA
protein.
Length = 1241
Score = 45.6 bits (103), Expect = 6e-05
Identities = 22/91 (24%), Positives = 43/91 (47%)
Frame = +3
Query: 351 NQETKYYALQILEQVILTRWKILPRNQCEGIKKYIVGLIIKNSSDPVTMESNKVYLKKLN 530
NQ+ +++ LQ++E I RW + + IK + ++ P S L+
Sbjct: 62 NQQVRHFGLQLIEYTIKYRWNCITHEEKVYIKDNAIKML-NVGVGPAEDRSLLPTKDALS 120
Query: 531 MILIQVLKREWPHNWETFISDIVGASKTNES 623
I+++++KREWP W + ++ A E+
Sbjct: 121 RIIVEMIKREWPQQWSDLLPELSQACTKGEA 151
>AY069790-1|AAL39935.1| 1047|Drosophila melanogaster SD03282p
protein.
Length = 1047
Score = 35.1 bits (77), Expect = 0.082
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 3/125 (2%)
Frame = +3
Query: 261 QQRVAQDILTALKEHPDAWT---RVDTILEYSQNQETKYYALQILEQVILTRWKILPRNQ 431
++R + L A K P+AW RV T + ++NQ +++ LE I RW L
Sbjct: 25 RKREIETNLLAFKSQPEAWQLCLRVATSSDTTENQFLWFFSTSTLEHTITRRWTQLTSTD 84
Query: 432 CEGIKKYIVGLIIKNSSDPVTMESNKVYLKKLNMILIQVLKREWPHNWETFISDIVGASK 611
+++ + + + P + ++ L +L +L KRE+P ++ + +K
Sbjct: 85 KTLLRETLWNSYAQLGATPNVAKRHRDTLAQLIALL---GKREFPEQDPNYMQHCMELTK 141
Query: 612 TNESL 626
T L
Sbjct: 142 TRFQL 146
>AL009188-3|CAA15674.2| 1060|Drosophila melanogaster EG:165H7.3
protein.
Length = 1060
Score = 35.1 bits (77), Expect = 0.082
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 3/125 (2%)
Frame = +3
Query: 261 QQRVAQDILTALKEHPDAWT---RVDTILEYSQNQETKYYALQILEQVILTRWKILPRNQ 431
++R + L A K P+AW RV T + ++NQ +++ LE I RW L
Sbjct: 38 RKREIETNLLAFKSQPEAWQLCLRVATSSDTTENQFLWFFSTSTLEHTITRRWTQLTSTD 97
Query: 432 CEGIKKYIVGLIIKNSSDPVTMESNKVYLKKLNMILIQVLKREWPHNWETFISDIVGASK 611
+++ + + + P + ++ L +L +L KRE+P ++ + +K
Sbjct: 98 KTLLRETLWNSYAQLGATPNVAKRHRDTLAQLIALL---GKREFPEQDPNYMQHCMELTK 154
Query: 612 TNESL 626
T L
Sbjct: 155 TRFQL 159
>AE014298-33|AAF45504.2| 1047|Drosophila melanogaster CG3923-PA
protein.
Length = 1047
Score = 34.7 bits (76), Expect = 0.11
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 5/127 (3%)
Frame = +3
Query: 261 QQRVAQDILTALKEHPDAWT---RVDTILEYSQNQETKYYALQILEQVILTRWKILPRNQ 431
++R + L A K P+AW RV T + ++NQ +++ LE I RW Q
Sbjct: 25 RKREIETNLLAFKSQPEAWQLCLRVATSSDTTENQFLWFFSTSTLEHTITRRW-----TQ 79
Query: 432 CEGIKKYIVGLIIKNSSDPVTMESN--KVYLKKLNMILIQVLKREWPHNWETFISDIVGA 605
K ++ + NS + N K + L ++ + KRE+P ++ +
Sbjct: 80 LTSTDKTLLRETLWNSYAQLVATPNVAKRHRDTLAQLIALLGKREFPEQDPNYMQHCMEL 139
Query: 606 SKTNESL 626
+KT L
Sbjct: 140 TKTRFQL 146
>BT003467-1|AAO39470.1| 640|Drosophila melanogaster RE70810p
protein.
Length = 640
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 327 QHESKHQDVPSKQSVYPEQHVVDPQQQNINSQQCCPIN*CP 205
QH+ Q +Q +P Q QQQ+ S PIN CP
Sbjct: 75 QHQQHQQQQHQQQQQHPHQQHQQHQQQHAASTTPVPINSCP 115
>AE014296-2127|AAF49930.2| 640|Drosophila melanogaster CG32105-PB
protein.
Length = 640
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -1
Query: 327 QHESKHQDVPSKQSVYPEQHVVDPQQQNINSQQCCPIN*CP 205
QH+ Q +Q +P Q QQQ+ S PIN CP
Sbjct: 75 QHQQHQQQQHQQQQQHPHQQHQQHQQQHAASTTPVPINSCP 115
>AE014297-4736|AAF57144.1| 526|Drosophila melanogaster CG11340-PA
protein.
Length = 526
Score = 29.1 bits (62), Expect = 5.4
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -3
Query: 85 STFIPHLIQHRENNLRRNQS 26
STF+PHL +HR + RR S
Sbjct: 404 STFVPHLKKHRRHGYRRTDS 423
>BT021357-1|AAX33505.1| 1953|Drosophila melanogaster LP14866p
protein.
Length = 1953
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 345 NIQVLYQHESKHQDVPSKQSVYPEQHVVDPQQQNINSQQ 229
N L H+ + Q P + +QH + QQQ + +QQ
Sbjct: 5 NAPWLPPHQQQQQQAPQQHPTPQQQHAMPQQQQTLPAQQ 43
>AY069185-1|AAL39330.1| 1385|Drosophila melanogaster GH23617p
protein.
Length = 1385
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 156 ATLEQQASKLLDFNQKLDINLLDNIVGCLYSAVGDQQRVAQDIL 287
A +EQ+A KLL QK N L +G LY A+G ++A+ I+
Sbjct: 542 AAIEQRA-KLLQVAQKHPYNALWAQLGDLYGAIGMPPKLARTIV 584
>AE014298-1786|AAF48179.2| 2528|Drosophila melanogaster CG32654-PC
protein.
Length = 2528
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 345 NIQVLYQHESKHQDVPSKQSVYPEQHVVDPQQQNINSQQ 229
N L H+ + Q P + +QH + QQQ + +QQ
Sbjct: 5 NAPWLPPHQQQQQQAPQQHPTPQQQHAMPQQQQTLPAQQ 43
>AE014296-2853|AAF49385.1| 1385|Drosophila melanogaster CG3764-PA
protein.
Length = 1385
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +3
Query: 156 ATLEQQASKLLDFNQKLDINLLDNIVGCLYSAVGDQQRVAQDIL 287
A +EQ+A KLL QK N L +G LY A+G ++A+ I+
Sbjct: 542 AAIEQRA-KLLQVAQKHPYNALWAQLGDLYGAIGMPPKLARTIV 584
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,318,952
Number of Sequences: 53049
Number of extensions: 540517
Number of successful extensions: 2440
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2409
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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