Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_E19
(407 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical pr... 37 0.006
Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical p... 37 0.006
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 29 0.98
Z68338-4|CAE48509.1| 104|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z68338-3|CAA92760.2| 105|Caenorhabditis elegans Hypothetical pr... 29 1.3
U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 27 3.9
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 27 3.9
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 27 3.9
AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical ... 27 3.9
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 27 3.9
Z75710-3|CAB00026.1| 275|Caenorhabditis elegans Hypothetical pr... 27 6.9
U80952-4|AAB38095.1| 662|Caenorhabditis elegans Hypothetical pr... 27 6.9
DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin p... 27 6.9
AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin p... 27 6.9
Z81050-13|CAB02857.3| 448|Caenorhabditis elegans Hypothetical p... 26 9.1
Z68301-2|CAA92625.1| 366|Caenorhabditis elegans Hypothetical pr... 26 9.1
Z49911-6|CAA90132.1| 831|Caenorhabditis elegans Hypothetical pr... 26 9.1
AF016447-2|AAG24012.1| 339|Caenorhabditis elegans Hypothetical ... 26 9.1
>Z83108-6|CAB05512.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 36.7 bits (81), Expect = 0.006
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +2
Query: 104 FDTSLSNLNDDEGCAEPSEDEYDALNDETFGHGSDEYDWEVEHEHLAGQLESSR 265
FD +L D + +DE+DA NDETFG G D E E+ A Q R
Sbjct: 20 FDDFPESLVDSDEDHNIFDDEFDAANDETFGGGLDNIGENAELENYATQTAKLR 73
>Z50070-13|CAA90402.1| 833|Caenorhabditis elegans Hypothetical
protein F43G6.9 protein.
Length = 833
Score = 36.7 bits (81), Expect = 0.006
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = +2
Query: 104 FDTSLSNLNDDEGCAEPSEDEYDALNDETFGHGSDEYDWEVEHEHLAGQLESSR 265
FD +L D + +DE+DA NDETFG G D E E+ A Q R
Sbjct: 20 FDDFPESLVDSDEDHNIFDDEFDAANDETFGGGLDNIGENAELENYATQTAKLR 73
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
protein C25F9.2 protein.
Length = 1469
Score = 29.5 bits (63), Expect = 0.98
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 137 EGCAEPSEDEY-DALNDETFGHGSDEYDWEVEHE 235
E C E S Y D DE DEYD E EHE
Sbjct: 641 ETCQEASCYSYKDVPEDELLDDSDDEYDEETEHE 674
>Z68338-4|CAE48509.1| 104|Caenorhabditis elegans Hypothetical
protein T24B8.3b protein.
Length = 104
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 131 DDEGCAEPSEDEYDALNDETFGHGSDEYDWEVEHEHLAGQLESSRRQNSG 280
++EG E ++DE D +NDE G E E E +G E G
Sbjct: 51 EEEGDDEDADDEEDEVNDEDSSEGEGEGSDAGEGEEGSGDDEDGEEAEGG 100
>Z68338-3|CAA92760.2| 105|Caenorhabditis elegans Hypothetical
protein T24B8.3a protein.
Length = 105
Score = 29.1 bits (62), Expect = 1.3
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +2
Query: 131 DDEGCAEPSEDEYDALNDETFGHGSDEYDWEVEHEHLAGQLESSRRQNSG 280
++EG E ++DE D +NDE G E E E +G E G
Sbjct: 52 EEEGDDEDADDEEDEVNDEDSSEGEGEGSDAGEGEEGSGDDEDGEEAEGG 101
>U80032-4|AAL16309.2| 1553|Caenorhabditis elegans Hypothetical
protein C32E12.4 protein.
Length = 1553
Score = 27.9 bits (59), Expect = 3.0
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +2
Query: 107 DTSLSNLNDDEGCAEPSEDEYDALNDETFGHGSDEYDWEVEHEH 238
+T S DDE E EDE D DE + EY+ E E+E+
Sbjct: 814 ETDESEYYDDE---EEIEDESDEYEDEEYWDEEIEYEDEEEYEY 854
Score = 27.5 bits (58), Expect = 3.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 113 SLSNLNDDEGCAEPSEDEYDALNDETFGHGSDEY--DWEVEHEHLAGQ 250
S S+ DDE E E+E + D T G +EY D E ++E+ Q
Sbjct: 619 SSSSTEDDEEYEEEDEEEEYSSGDWTEGEDDEEYITDEEEDNEYSVSQ 666
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 264 DARTAASTRLPTHSSSCHCRS*FWTIRTRRSPGR 365
D TAA +C CR F I RR PGR
Sbjct: 1540 DCHTAADCIDQVQGYTCQCRDGFKDIGDRRRPGR 1573
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 264 DARTAASTRLPTHSSSCHCRS*FWTIRTRRSPGR 365
D TAA +C CR F I RR PGR
Sbjct: 2124 DCHTAADCIDQVQGYTCQCRDGFKDIGDRRRPGR 2157
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 264 DARTAASTRLPTHSSSCHCRS*FWTIRTRRSPGR 365
D TAA +C CR F I RR PGR
Sbjct: 1540 DCHTAADCIDQVQGYTCQCRDGFKDIGDRRRPGR 1573
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 264 DARTAASTRLPTHSSSCHCRS*FWTIRTRRSPGR 365
D TAA +C CR F I RR PGR
Sbjct: 2124 DCHTAADCIDQVQGYTCQCRDGFKDIGDRRRPGR 2157
>AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical
protein Y87G2A.1 protein.
Length = 780
Score = 27.5 bits (58), Expect = 3.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -1
Query: 218 SHIRRIHGRMSHRSMHRIRPLRVLRNLRRHLSSIMKYRTQRMNL 87
SH HGR + + + R L+S+ KY+ +RM L
Sbjct: 302 SHYMYTHGRRMTIERYEFKDVNTFEQYLRELNSMGKYKFKRMGL 345
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 27.5 bits (58), Expect = 3.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 264 DARTAASTRLPTHSSSCHCRS*FWTIRTRRSPGR 365
D TAA +C CR F I RR PGR
Sbjct: 2124 DCHTAADCIDQVQGYTCQCRDGFKDIGDRRRPGR 2157
>Z75710-3|CAB00026.1| 275|Caenorhabditis elegans Hypothetical
protein D1081.5 protein.
Length = 275
Score = 26.6 bits (56), Expect = 6.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 192 SAMDPTNMTGRWNMSTSPDSSRAVD 266
S + P N++ WN+ P S+R +D
Sbjct: 234 SEVTPVNISNLWNVKLRPGSNRKID 258
>U80952-4|AAB38095.1| 662|Caenorhabditis elegans Hypothetical
protein F54H5.5 protein.
Length = 662
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 192 SAMDPTNMTGRWNMSTSPDSSRAVD 266
S PTN+ WN+ P S+R +D
Sbjct: 195 SETTPTNLQTLWNVKLRPGSNRKID 219
>DQ340626-1|ABC65814.1| 782|Caenorhabditis elegans chondroitin
proteoglycan-4 protein.
Length = 782
Score = 26.6 bits (56), Expect = 6.9
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +2
Query: 116 LSNLNDDEGCAEPSEDEYDALNDETFGHGSDEYDWEVEHEHLAGQLESSRRQNSGIDE 289
+S + +E E D ++E G GS EYD +G+ SS +E
Sbjct: 513 ISEKSTEESSGSSGEMSGDGSDNEASGEGSGEYDASGSSGDNSGEFNSSGSSGEASEE 570
>AF022968-9|AAB69883.3| 782|Caenorhabditis elegans Chondroitin
proteoglycan protein 4 protein.
Length = 782
Score = 26.6 bits (56), Expect = 6.9
Identities = 15/58 (25%), Positives = 23/58 (39%)
Frame = +2
Query: 116 LSNLNDDEGCAEPSEDEYDALNDETFGHGSDEYDWEVEHEHLAGQLESSRRQNSGIDE 289
+S + +E E D ++E G GS EYD +G+ SS +E
Sbjct: 513 ISEKSTEESSGSSGEMSGDGSDNEASGEGSGEYDASGSSGDNSGEFNSSGSSGEASEE 570
>Z81050-13|CAB02857.3| 448|Caenorhabditis elegans Hypothetical
protein C50B6.8 protein.
Length = 448
Score = 26.2 bits (55), Expect = 9.1
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +1
Query: 238 PRRTAREQSTPEQRHRR--DCQLTAR 309
P RTAR +S QRH+R +C + +
Sbjct: 30 PNRTARSESPARQRHQRPSECSICGK 55
>Z68301-2|CAA92625.1| 366|Caenorhabditis elegans Hypothetical
protein W01B6.2 protein.
Length = 366
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 152 PSEDEYDALNDETFGHGSDEYDWEV 226
PSE E D + + TF G DW++
Sbjct: 2 PSEKEDDVMKNVTFAEGKKFGDWKI 26
>Z49911-6|CAA90132.1| 831|Caenorhabditis elegans Hypothetical
protein M28.8 protein.
Length = 831
Score = 26.2 bits (55), Expect = 9.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 152 PSEDEYDALNDETFGHGSDEYDWEVE 229
P+ YD LND FG+G+ Y+ ++
Sbjct: 61 PNSKTYDDLNDLIFGNGAVSYNQVIQ 86
>AF016447-2|AAG24012.1| 339|Caenorhabditis elegans Hypothetical
protein C54F6.9 protein.
Length = 339
Score = 26.2 bits (55), Expect = 9.1
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = -1
Query: 302 VSWQSRRCRCSGVDCSRAVRRGAHVPPPSH-IRRIHGRMSHRSMHRIRPLRVLRNLRRHL 126
VS S +C+ R ++ G +PP ++ I + + +H+ + L +LR+ +R
Sbjct: 52 VSTNSNHLKCAACRFKRCLQLGMKLPPSNNAILELENQKAHKLKKLLNGL-ILRDAKRCE 110
Query: 125 SSIMKYRTQRMNLPLDFFINRCT 57
+ Y +L D IN+ T
Sbjct: 111 RHLTFYTRSDPSLE-DILINKKT 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,887,362
Number of Sequences: 27780
Number of extensions: 185995
Number of successful extensions: 712
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -