Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_E17
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88168-4|AAC24402.1|  342|Caenorhabditis elegans Hypothetical pr...    67   9e-12
Z81118-9|CAM84694.1|  208|Caenorhabditis elegans Hypothetical pr...    33   0.17 
U55369-10|AAK52180.2|  389|Caenorhabditis elegans Hypothetical p...    29   2.1  
U21323-2|AAM22051.1|  155|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U21323-1|AAM22050.1|  542|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr...    28   4.9  
U21324-19|AAK68224.1|  407|Caenorhabditis elegans C-type lectin ...    28   4.9  
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ...    28   4.9  
AF016445-6|AAC69053.1|  250|Caenorhabditis elegans Hypothetical ...    28   4.9  
AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical ...    27   8.6  

>U88168-4|AAC24402.1|  342|Caenorhabditis elegans Hypothetical
           protein K11H12.8a protein.
          Length = 342

 Score = 67.3 bits (157), Expect = 9e-12
 Identities = 37/84 (44%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = +1

Query: 319 RSQPTLRERLMAPAGPNAFXXXXXXXXXXXXXXXXXXCYYGSGVKPGT-LQESHLWPQYV 495
           R+ PTL+ERL+ P     F                   YYG   K  + LQ+S +WP YV
Sbjct: 50  RTGPTLKERLLGPTTGKPFVYGTYALAGASVFGVGALMYYGLVSKEQSILQKSAIWPSYV 109

Query: 496 KERIKTTYGYIAGSLVLTAGSAVA 567
           +ERI TTY Y+AGSL LTA S VA
Sbjct: 110 RERISTTYAYLAGSLALTAVSGVA 133


>Z81118-9|CAM84694.1|  208|Caenorhabditis elegans Hypothetical
           protein T10G3.8 protein.
          Length = 208

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 253 NFVPRNYVVRNYAREPRTRVATRSQPTLRERLMAP 357
           + VP+N V +N + +PR RV TR  P+   +L  P
Sbjct: 119 SLVPKNEVKKNASPQPRVRVITRKSPSPLRKLSTP 153


>U55369-10|AAK52180.2|  389|Caenorhabditis elegans Hypothetical
           protein C18C4.9 protein.
          Length = 389

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 16/64 (25%), Positives = 29/64 (45%)
 Frame = -1

Query: 633 NGQ*WTSIHFLXPNLEVRCXENSNCTTSSQHQRTRDVSICCFYTFFHILWPKVRFLKSTW 454
           N Q  +S+ F  P +     E +  T+S+           C + F H+  P++ F++ TW
Sbjct: 156 NMQKSSSLKFTRPGVRSETKETTPSTSSNP------TMFPCIHQFLHLTQPQILFVRKTW 209

Query: 453 FYPR 442
            + R
Sbjct: 210 NHAR 213


>U21323-2|AAM22051.1|  155|Caenorhabditis elegans Hypothetical
           protein C45G9.6b protein.
          Length = 155

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 195 VYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKG 311
           V R  G  CN+ +   S   +CT  + G K+C  TSN G
Sbjct: 58  VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95


>U21323-1|AAM22050.1|  542|Caenorhabditis elegans Hypothetical
           protein C45G9.6a protein.
          Length = 542

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +3

Query: 195 VYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKG 311
           V R  G  CN+ +   S   +CT  + G K+C  TSN G
Sbjct: 58  VQRDEGGYCNSNTDCRSGL-YCTASVNGVKICLSTSNGG 95


>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical protein
            F40E10.4 protein.
          Length = 1410

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = +3

Query: 132  KNLNPVEINVYVFRINYVITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRT--SN 305
            KN   ++  +    IN V  N+ ++L    N E   ++T  FC    CG   CT    S 
Sbjct: 1251 KNSESLKGCISSITINEVPINLQQALE-NVNTEQSCSATVNFCAGIDCGNGKCTNNALSP 1309

Query: 306  KG-RYTLTTHTSGE 344
            KG      +H SGE
Sbjct: 1310 KGYMCQCDSHFSGE 1323


>U21324-19|AAK68224.1|  407|Caenorhabditis elegans C-type lectin
           protein 6 protein.
          Length = 407

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +3

Query: 411 SWTSCSVLLWLWGKTRYSSGISP 479
           SW S SVL WL G T   + ISP
Sbjct: 219 SWPSTSVLTWLDGSTSDYNNISP 241


>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
            protein F40E10.4 protein.
          Length = 1410

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = +3

Query: 132  KNLNPVEINVYVFRINYVITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRT--SN 305
            KN   ++  +    IN V  N+ ++L    N E   ++T  FC    CG   CT    S 
Sbjct: 1251 KNSESLKGCISSITINEVPINLQQALE-NVNTEQSCSATVNFCAGIDCGNGKCTNNALSP 1309

Query: 306  KG-RYTLTTHTSGE 344
            KG      +H SGE
Sbjct: 1310 KGYMCQCDSHFSGE 1323


>AF016445-6|AAC69053.1|  250|Caenorhabditis elegans Hypothetical
           protein T05B4.10 protein.
          Length = 250

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 19/73 (26%), Positives = 30/73 (41%)
 Frame = +3

Query: 186 ITNVYRSLGVQCNAESKIASTTKFCTEKLCGQKLCTRTSNKGRYTLTTHTSGETHGTCWT 365
           +TN    L + CN          +C ++ CG+  C  T+  G  T+T+       GTC +
Sbjct: 163 VTNCGNDLSI-CNTVGMQTFVNTYC-QRTCGR--CPSTTASGSVTVTS-------GTCTS 211

Query: 366 KCIQLGQGCISWS 404
                   C +WS
Sbjct: 212 YIADSSSNCAAWS 224


>AF016445-4|AAC69058.1|  312|Caenorhabditis elegans Hypothetical
           protein T05B4.8 protein.
          Length = 312

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = +3

Query: 288 CTRTSNKGRYTLTTHTSGETHGTCWTKCIQLGQGCISWSLCSWTSCSVLLWLWGK 452
           C RT  +   T T+ +   T GTC +        C SW+  +   C VL  L  K
Sbjct: 9   CQRTCGRCPSTTTSGSVTVTSGTCTSYIADSSSNCASWARTT-RFCVVLSLLLNK 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,612,838
Number of Sequences: 27780
Number of extensions: 302512
Number of successful extensions: 887
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)