Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_D21
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 157 8e-39
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 157 8e-39
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 157 8e-39
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 157 8e-39
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 150 1e-36
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 149 2e-36
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 147 7e-36
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 147 7e-36
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 33 0.13
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 32 0.40
U41556-7|AAP68954.1| 145|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41556-5|AAK39193.1| 212|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41556-6|AAP68953.1| 248|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 28 6.6
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 28 6.6
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 28 6.6
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 28 6.6
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 157 bits (380), Expect = 8e-39
Identities = 72/118 (61%), Positives = 89/118 (75%), Gaps = 3/118 (2%)
Frame = +1
Query: 241 TKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKV 420
T G HGFHVH++GD+TNGC SAG HFNP + HGGP S +RHVGDLGN+EA D GV K+
Sbjct: 39 TPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKI 97
Query: 421 SIQDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 585
+ D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 98 KLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
Score = 35.1 bits (77), Expect = 0.043
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 129 MPAKAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQXLD*G 248
M +AV VLRG+ V+GT++ Q+ E V+ GE++ L G
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPG 41
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 157 bits (380), Expect = 8e-39
Identities = 72/118 (61%), Positives = 89/118 (75%), Gaps = 3/118 (2%)
Frame = +1
Query: 241 TKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKV 420
T G HGFHVH++GD+TNGC SAG HFNP + HGGP S +RHVGDLGN+EA D GV K+
Sbjct: 39 TPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKI 97
Query: 421 SIQDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 585
+ D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 98 KLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
Score = 35.1 bits (77), Expect = 0.043
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 129 MPAKAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQXLD*G 248
M +AV VLRG+ V+GT++ Q+ E V+ GE++ L G
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPG 41
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 157 bits (380), Expect = 8e-39
Identities = 72/118 (61%), Positives = 89/118 (75%), Gaps = 3/118 (2%)
Frame = +1
Query: 241 TKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKV 420
T G HGFHVH++GD+TNGC SAG HFNP + HGGP S +RHVGDLGN+EA D GV K+
Sbjct: 39 TPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKI 97
Query: 421 SIQDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 585
+ D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 98 KLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
Score = 35.1 bits (77), Expect = 0.043
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 129 MPAKAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQXLD*G 248
M +AV VLRG+ V+GT++ Q+ E V+ GE++ L G
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPG 41
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 157 bits (380), Expect = 8e-39
Identities = 72/118 (61%), Positives = 89/118 (75%), Gaps = 3/118 (2%)
Frame = +1
Query: 241 TKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKV 420
T G HGFHVH++GD+TNGC SAG HFNP + HGGP S +RHVGDLGN+EA D GV K+
Sbjct: 61 TPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKI 119
Query: 421 SIQDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 585
+ D+ ++L+GPN+++GR++VVHA DDLG G E SK TGNAG R ACGVI LA
Sbjct: 120 KLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 177
Score = 35.1 bits (77), Expect = 0.043
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 129 MPAKAVCVLRGD-VSGTVFFDQQDEKSPVVVSGEVQXLD*G 248
M +AV VLRG+ V+GT++ Q+ E V+ GE++ L G
Sbjct: 23 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPG 63
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 150 bits (363), Expect = 1e-36
Identities = 71/116 (61%), Positives = 84/116 (72%), Gaps = 3/116 (2%)
Frame = +1
Query: 247 GKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSI 426
G HGFH+H++GD+T+GCTSAG HFNP K +HGG S VRHVGDLGN+EA D GV K+
Sbjct: 61 GLHGFHIHQYGDSTDGCTSAGPHFNPCKMNHGGRDSVVRHVGDLGNVEAGAD-GVAKIKF 119
Query: 427 QDSQISLHGPNSIIGRTLVVHADPDDLGLG---GHELSKTTGNAGGRIACGVIGLA 585
D +SL G N++IGR++VVH D DDLG G E S TGNAG R ACGVI LA
Sbjct: 120 SDKVVSLFGANTVIGRSMVVHVDRDDLGQGIDDKAEESLKTGNAGARAACGVIALA 175
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 149 bits (360), Expect = 2e-36
Identities = 69/118 (58%), Positives = 83/118 (70%)
Frame = +1
Query: 247 GKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSI 426
GKHGFH+HE GD NGC SAG H+NP K HG P + RH+GDLGNIE+ SG T +S+
Sbjct: 65 GKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIES-PASGDTLISV 123
Query: 427 QDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIGLAKI*IL 600
DS SL G SIIGR++V+H DDLG G + SKTTGNAG R+ACG IG+ + IL
Sbjct: 124 SDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIGIVEERIL 181
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 147 bits (356), Expect = 7e-36
Identities = 67/111 (60%), Positives = 79/111 (71%)
Frame = +1
Query: 247 GKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSI 426
GKHGFH+HE GD NGC SAG H+NP K HG P + RH+GDLGNIE+ SG T +S+
Sbjct: 65 GKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIES-PASGDTLISV 123
Query: 427 QDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIG 579
DS SL G SIIGR++V+H DDLG G + SKTTGNAG R+ACG IG
Sbjct: 124 SDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIG 174
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 147 bits (356), Expect = 7e-36
Identities = 67/111 (60%), Positives = 79/111 (71%)
Frame = +1
Query: 247 GKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSI 426
GKHGFH+HE GD NGC SAG H+NP K HG P + RH+GDLGNIE+ SG T +S+
Sbjct: 65 GKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIES-PASGDTLISV 123
Query: 427 QDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIACGVIG 579
DS SL G SIIGR++V+H DDLG G + SKTTGNAG R+ACG IG
Sbjct: 124 SDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIG 174
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
protein T01D3.3b protein.
Length = 1011
Score = 33.5 bits (73), Expect = 0.13
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 247 GKHGFHVHEFGDNTNGCTSAGAHFN 321
G+H +H+FGD++ GC+ GA F+
Sbjct: 921 GRHAVVLHQFGDSSEGCSRVGAPFS 945
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 33.5 bits (73), Expect = 0.13
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 247 GKHGFHVHEFGDNTNGCTSAGAHFN 321
G+H +H+FGD++ GC+ GA F+
Sbjct: 712 GRHAVVLHQFGDSSEGCSRVGAPFS 736
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 31.9 bits (69), Expect = 0.40
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -1
Query: 568 HKQYGHQHYQWSYLAHGHRVPSHQGQHGQ 482
H +G H HGH P+H G HG+
Sbjct: 580 HGSHGVHHGHHESHGHGHHAPAHHGHHGE 608
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 568 HKQYGHQHYQWSYLAHGHRVPSHQGQHGQ 482
H H H++ S+ HGH P+H G HG+
Sbjct: 434 HAPAHHGHHE-SH-GHGHHSPAHHGHHGE 460
>U41556-7|AAP68954.1| 145|Caenorhabditis elegans Hypothetical
protein C25B8.4c protein.
Length = 145
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 521 MS*VRPLVMLVAVLLVESLAWLRFKYFHFSYVGLGTTIFSD 643
MS + LV+LVA + S + + K F++SY GT F+D
Sbjct: 1 MSRIFKLVLLVAAVGFVSTRFAQVKLFNWSYKDFGTNAFTD 41
>U41556-5|AAK39193.1| 212|Caenorhabditis elegans Hypothetical
protein C25B8.4a protein.
Length = 212
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 521 MS*VRPLVMLVAVLLVESLAWLRFKYFHFSYVGLGTTIFSD 643
MS + LV+LVA + S + + K F++SY GT F+D
Sbjct: 1 MSRIFKLVLLVAAVGFVSTRFAQVKLFNWSYKDFGTNAFTD 41
>U41556-6|AAP68953.1| 248|Caenorhabditis elegans Hypothetical
protein C25B8.4b protein.
Length = 248
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 539 LVMLVAVLLVESLAWLRFKYFHFSYVGLGTTIFSD 643
LV+LVA + S + + K F++SY GT F+D
Sbjct: 43 LVLLVAAVGFVSTRFAQVKLFNWSYKDFGTNAFTD 77
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 478 LVVHADPDDLGLGGHELSKTTGNAGGR 558
L+ H P+DL + ELSK G+ GR
Sbjct: 484 LITHVKPEDLDVLASELSKMGGHHNGR 510
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 478 LVVHADPDDLGLGGHELSKTTGNAGGR 558
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 478 LVVHADPDDLGLGGHELSKTTGNAGGR 558
L+ H P+DL + ELSK G+ GR
Sbjct: 494 LITHVKPEDLDVLASELSKMGGHHNGR 520
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 478 LVVHADPDDLGLGGHELSKTTGNAGGR 558
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 478 LVVHADPDDLGLGGHELSKTTGNAGGR 558
L+ H P+DL + ELSK G+ GR
Sbjct: 131 LITHVKPEDLDVLASELSKMGGHHNGR 157
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 478 LVVHADPDDLGLGGHELSKTTGNAGGR 558
L+ H P+DL + ELSK G+ GR
Sbjct: 204 LITHVKPEDLDVLASELSKMGGHHNGR 230
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1
Query: 478 LVVHADPDDLGLGGHELSKTTGNAGGR 558
L+ H P+DL + ELSK G+ GR
Sbjct: 499 LITHVKPEDLDVLASELSKMGGHHNGR 525
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,176,638
Number of Sequences: 27780
Number of extensions: 276170
Number of successful extensions: 748
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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