Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_D18
         (407 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0359 + 24679907-24680146,24680511-24680939,24681111-246824...    27   4.3  
04_03_0116 - 11448012-11448525,11448693-11448763,11449139-114494...    27   5.7  
03_02_0343 - 7649210-7650154                                           27   5.7  
02_03_0050 + 14433013-14433303                                         27   5.7  
01_01_1029 - 8152182-8152589                                           27   5.7  
07_03_1031 - 23389263-23389541                                         27   7.6  
02_01_0341 + 2444419-2445495                                           27   7.6  

>04_04_0359 +
           24679907-24680146,24680511-24680939,24681111-24682402,
           24682486-24682737,24682818-24682928,24683016-24683076,
           24683178-24683270,24683348-24683533
          Length = 887

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
 Frame = -1

Query: 206 YRSTNPFCSWQQPRPSGDQDGGRXDAD---PRETQWDCIRPGTK 84
           Y S +  CS   P+     DG   D D   P+E  WD +  G K
Sbjct: 47  YSSPSDPCSSPSPKRRKKDDGEEGDKDYIPPKEGDWDHVSNGDK 90


>04_03_0116 -
           11448012-11448525,11448693-11448763,11449139-11449421,
           11449520-11449672,11449750-11450219,11451470-11451631,
           11451718-11451987,11452229-11452633
          Length = 775

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -2

Query: 118 KRNGTVSDLAQNGXWFSSGATPHKHVTT 35
           +R   V+D+  NG W SSGA PH  + T
Sbjct: 590 ERKMDVNDIYVNGLWISSGA-PHPLMVT 616


>03_02_0343 - 7649210-7650154
          Length = 314

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = +1

Query: 97  RIQSHCVSRGS---ASXRPPSWSPLGRGCCQLQNGFVERYHV 213
           R   HC   GS   AS  PP   P+G G   L  GF    HV
Sbjct: 174 RAAQHCGMPGSPGLASAFPPFAQPIGHGSSDLPFGFGNGDHV 215


>02_03_0050 + 14433013-14433303
          Length = 96

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1

Query: 154 SPLGRGCCQLQNGFVERYHVPIYLVLSNCKF 246
           S LGR   Q Q G V R H P+Y+  S C++
Sbjct: 19  SSLGRR--QQQQGAVPRGHFPVYVGESRCRY 47


>01_01_1029 - 8152182-8152589
          Length = 135

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +2

Query: 2   NCWALISHRVSCGDVFVWCSS 64
           +C  L+S R +CGD FV C S
Sbjct: 103 HCVDLLSDRKNCGDCFVRCPS 123


>07_03_1031 - 23389263-23389541
          Length = 92

 Score = 26.6 bits (56), Expect = 7.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 203 RSTNPFCSWQQPRPSGDQDGG 141
           R+  P+CSWQ    S D  GG
Sbjct: 3   RTCLPWCSWQLAAASADNSGG 23


>02_01_0341 + 2444419-2445495
          Length = 358

 Score = 26.6 bits (56), Expect = 7.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 81  PFCARSDTVPLRFAWVCIXSAAILVAAGAWLLPAT 185
           PFC R++ VP    W  + SAA     GAW L +T
Sbjct: 225 PFCGRAEYVPEHGLWFGL-SAANDDVFGAWDLSST 258


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,692,569
Number of Sequences: 37544
Number of extensions: 190074
Number of successful extensions: 504
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 718652880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)