Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_D18
         (407 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.1  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   4.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.1  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    20   9.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   9.4  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 214  VHDTVLQTHFVAGSNHA 164
            V+   ++TH VAGSN A
Sbjct: 1567 VYQLKVETHNVAGSNQA 1583


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 214  VHDTVLQTHFVAGSNHA 164
            V+   ++TH VAGSN A
Sbjct: 1563 VYQLKVETHNVAGSNQA 1579


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 45  CLCGVAPELNQXPFCARSDTVPLRFAWVCIXSAAILVAAGA 167
           CL    P +    FC  S ++ L  A   +   A+ + AGA
Sbjct: 45  CLPFCGPNVINPFFCDMSPSLSLLCADTRLNKLAVFIVAGA 85


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +2

Query: 2   NCWALISHRVSCGDV 46
           N W  IS+ ++C D+
Sbjct: 273 NTWEPISNLINCSDI 287


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = +3

Query: 45  CLCGVAPELNQXPFCARSDTVPLRFAWVCIXSAAILVAAGA 167
           CL    P +    FC  S  + L  A   +   A+ + AGA
Sbjct: 44  CLPFCGPNVINPFFCDMSPLLSLVCADTRLNKLAVFIVAGA 84


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +1

Query: 118 SRGSASXRPPSWSPLGRGCCQLQNG 192
           ++G A  + PS+ P     C  +NG
Sbjct: 876 AQGRAILKIPSYKPASTPGCSSKNG 900


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,071
Number of Sequences: 438
Number of extensions: 2149
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)