Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_D15
         (600 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    23   1.7  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    23   1.7  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    23   1.7  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    23   1.7  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   5.3  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   7.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   7.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.0  

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +2

Query: 14  VVHIVRKNFKYKNCCNVLNNPY----FKKKHFSNV 106
           ++  +  N+KY N  N  NN Y    +KK  + N+
Sbjct: 81  IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNI 115


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +2

Query: 14  VVHIVRKNFKYKNCCNVLNNPY----FKKKHFSNV 106
           ++  +  N+KY N  N  NN Y    +KK  + N+
Sbjct: 81  IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNI 115


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +2

Query: 14  VVHIVRKNFKYKNCCNVLNNPY----FKKKHFSNV 106
           ++  +  N+KY N  N  NN Y    +KK  + N+
Sbjct: 81  IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNI 115


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = +2

Query: 14  VVHIVRKNFKYKNCCNVLNNPY----FKKKHFSNV 106
           ++  +  N+KY N  N  NN Y    +KK  + N+
Sbjct: 81  IISSLSNNYKYSNYNNYNNNNYNNNNYKKLQYYNI 115


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 23  IVRKNFKYKNCCNVLNNPYFKKKHFSNVFER 115
           IVR +    + C+V N+P+ KK  F    ER
Sbjct: 340 IVRNHLN--STCSVTNSPHQKKLRFHLAKER 368


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/19 (31%), Positives = 16/19 (84%)
 Frame = +1

Query: 364 RTKVRRQRSIYQVHYNIEK 420
           +T V RQ++IY++ +++++
Sbjct: 29  KTYVTRQKNIYELFWHVDQ 47


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/19 (31%), Positives = 16/19 (84%)
 Frame = +1

Query: 364 RTKVRRQRSIYQVHYNIEK 420
           +T V RQ++IY++ +++++
Sbjct: 29  KTYVTRQKNIYELFWHVDQ 47


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = +1

Query: 352 ERPKRTKVRRQRSIYQVHYNIEKRNDELMTKPLALQKGLEIQAYDLQV 495
           E  K   +  Q+  Y  HY   K    L  +P+     LE+   D +V
Sbjct: 448 ENYKSLNLAAQKREYYSHYVAFKSLSYLKKQPVIANGSLEVDVIDGRV 495


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,193
Number of Sequences: 438
Number of extensions: 3818
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)