Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_D14
(609 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F3.09 |hem1||5-aminolevulinate synthase|Schizosaccharomyces... 39 7e-04
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 29 0.40
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 0.53
SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces pomb... 29 0.70
SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 29 0.70
SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat protein|Schizo... 28 1.2
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 2.1
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 26 3.7
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 26 3.7
SPAC13G7.06 |met16||phosphoadenosine phosphosulfate reductase|Sc... 26 3.7
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.5
SPBC336.08 |spc24||spindle pole body protein Spc24|Schizosacchar... 25 6.5
SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomy... 25 8.7
SPAC1687.19c |||queuine tRNA-ribosyltransferase|Schizosaccharomy... 25 8.7
>SPAC2F3.09 |hem1||5-aminolevulinate synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 38.7 bits (86), Expect = 7e-04
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = +2
Query: 425 EAPKEMTEDI--AEPATP--YHYENFFHDQINAKKRDYSYRVFRKVSRLAADGVYP 580
+ PK D+ PAT + Y+ F+ ++++ K RD SYR F ++RLA + YP
Sbjct: 112 QMPKHYASDLNGVGPATTPRFDYDTFYREELDKKHRDKSYRYFNNINRLAKE--YP 165
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 29.5 bits (63), Expect = 0.40
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 377 NDETKCPFIQQNSIISEAPKEMTEDIAEPATPYHYENFFHDQINAKKRDYSYRVFRKVSR 556
+DE C F+ + + + +D+ E + YHYE F Q+++ K S +R
Sbjct: 260 DDENHCEFVFLRNFLM---RTHLQDLIETTSYYHYEKFRFKQLSSLKEQSSL-----ATR 311
Query: 557 LAADG-VYPESP 589
+ + VYP P
Sbjct: 312 MGSPAPVYPSEP 323
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 29.1 bits (62), Expect = 0.53
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -2
Query: 143 LWSVTDQXGSSADSDFHL*SLCRHIDLNVLLLSSRKSYNNYKNIF 9
LW+ D S + + HL +I LN + + +K ++NY+++F
Sbjct: 1036 LWASCDMVLPSEEFEMHLRGHLNNIRLNCEVSNCKKCFSNYEDMF 1080
>SPCC1739.14 |npp106||nucleoporin Npp106|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 933
Score = 28.7 bits (61), Expect = 0.70
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +2
Query: 347 IISRGFRSLGNDETKCPFIQQNSIISEAPKEMTEDI 454
I+SRG S+ + E+K I N + SEAP + ++
Sbjct: 736 IVSRGLWSIDSKESKNMHISSNVVASEAPDALAANL 771
>SPAC1786.02 |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 644
Score = 28.7 bits (61), Expect = 0.70
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -3
Query: 388 GFVISQRTKSTRYNRAIISVLLHQGR 311
GF++ T STRYN A+I V L Q R
Sbjct: 335 GFLVG--TSSTRYNEALIDVSLRQSR 358
>SPCC1620.04c |mug55||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 509
Score = 27.9 bits (59), Expect = 1.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 463 RFRDVLGHFLRSFRNDRVLLNEGAFG 386
+F + G+ ++ NDRVL EG FG
Sbjct: 464 KFYKIWGNEMQEIHNDRVLYREGIFG 489
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 27.1 bits (57), Expect = 2.1
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = -2
Query: 155 PNVPLWSVTDQXGSSADSDFHL*SLCRHIDLNVLLLSSRKS 33
PN+ W+ ++ G A F++ +C+ + + LL RKS
Sbjct: 2308 PNLGAWNPSEGPGPCASPCFYIALICQFVAVGGLLYHYRKS 2348
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 268 VFGIVEPSVREKLWCDPDEAVRKLLPDYISWIS 366
V + P + + +CD + RKLL D++S ++
Sbjct: 1598 VLADLPPKIIQDYYCDMSDLQRKLLNDFVSQLN 1630
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = -2
Query: 392 IWFRHFPKNEIHEI*SGNNFRTASSGSHHNFSRTLGSTIPKTDKAFYDF 246
+W + P N + + +G+N R + +H++ LG T F+DF
Sbjct: 130 LWLGNLP-NSVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWDF 177
>SPAC13G7.06 |met16||phosphoadenosine phosphosulfate
reductase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 266
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -2
Query: 335 FRTASSGSHHNFSRTLGSTIPKTDKAFYDFYV 240
+R A + + F++ G + +TD++ YDF V
Sbjct: 105 YRCAEAANEKEFAQKFGEKLWETDESRYDFLV 136
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.4 bits (53), Expect = 6.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = -2
Query: 389 WFRHFPKNEIHEI*SGNNFRTASSGSHHNFSRTLGS 282
W+ F N + + SGN F T S + F R L +
Sbjct: 1506 WWNLFSNNMSYPLRSGNLFPTLDSSPNKKFGRHLAT 1541
>SPBC336.08 |spc24||spindle pole body protein
Spc24|Schizosaccharomyces pombe|chr 2|||Manual
Length = 198
Score = 25.4 bits (53), Expect = 6.5
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 362 FRSLGNDETKCPFIQQNSIISEAPKEM-TEDIAEPATPYHYENFFHDQINAKK 517
+ SLG D +I ++ T I+ +PY Y N+F D ++ K
Sbjct: 143 YHSLGFDLETAENTGNKRVIIHTENDLQTVQISNKYSPYFYSNYFWDLLDDSK 195
>SPAC29E6.06c ||SPAC30.10c|cysteine-tRNA ligase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 754
Score = 25.0 bits (52), Expect = 8.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 360 DFVLWEMTKPNAPSFSKTLS 419
DF LW+ +KP PS+ S
Sbjct: 321 DFALWKASKPGEPSWDSPWS 340
>SPAC1687.19c |||queuine tRNA-ribosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 25.0 bits (52), Expect = 8.7
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 434 KEMTEDIAEPATPYHYENFFHDQINAKKRDY 526
++M E I + P +NFFH+ + K +Y
Sbjct: 357 RDMRESIIKDEFPSFVKNFFHEWNHGDKSNY 387
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,541,946
Number of Sequences: 5004
Number of extensions: 51828
Number of successful extensions: 163
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 268287866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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