Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_D14
         (609 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97407-1|AAB52478.2|  411|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr...    27   7.9  
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p...    27   7.9  
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr...    27   7.9  
AC024801-7|AAK95892.2|  606|Caenorhabditis elegans Hypothetical ...    27   7.9  

>U97407-1|AAB52478.2|  411|Caenorhabditis elegans Hypothetical
           protein C34G6.5 protein.
          Length = 411

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = -3

Query: 439 FLRSFRNDRVLLNEGAFGFVISQRTKSTRYNRAIISV 329
           F R ++    ++ EG+FG VIS   ++T+  RAI ++
Sbjct: 23  FQRKYQLQENIIGEGSFGTVISATCRTTQEKRAIKAI 59


>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
            F25H8.3 protein.
          Length = 2165

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = +2

Query: 23   SCCMTCGSSAKVRSNRY--DDTN-FINESRC 106
            SC  TCGS+ K+    Y  DD+N  ++ES C
Sbjct: 1029 SCSETCGSNGKMHRKSYCVDDSNRRVDESLC 1059


>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
            protein F25H8.3 protein.
          Length = 2165

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
 Frame = +2

Query: 23   SCCMTCGSSAKVRSNRY--DDTN-FINESRC 106
            SC  TCGS+ K+    Y  DD+N  ++ES C
Sbjct: 1029 SCSETCGSNGKMHRKSYCVDDSNRRVDESLC 1059


>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
           protein C56E6.6 protein.
          Length = 1102

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 251 RKMPCPFLGSLNQAFVKNYGATLMKQYGNYCPIISRGFRSL 373
           R+  C FLGS++Q    +  +  + +   +C  I+RG R L
Sbjct: 549 RRFSCEFLGSISQVHQLDLSSNQINEIDIFC--IARGIRKL 587


>AC024801-7|AAK95892.2|  606|Caenorhabditis elegans Hypothetical
           protein Y50D7A.2 protein.
          Length = 606

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 338 YCPIISRGFRSLGNDETKCPFIQQNSIISEA 430
           +CP      RSLG ++  CP+      I+ A
Sbjct: 21  FCPNFQEDLRSLGREKKICPYFTARQAINRA 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,774,863
Number of Sequences: 27780
Number of extensions: 276352
Number of successful extensions: 825
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)