Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_D14
         (609 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    24   1.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   1.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.1  
AF487333-1|AAL93262.1|   80|Apis mellifera integrin betaPS protein.    22   5.4  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   7.1  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +2

Query: 20  CSCCMTCGSSAKVRSNRYDDTNFIN 94
           C C MTC +  K  ++R  +TN ++
Sbjct: 755 CDCEMTCPAGCKCYNDRTWNTNAVD 779


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +2

Query: 101 RCQLSSQXDRSQTTVERSATVRAN 172
           RCQLS++ DRS+  ++  A + AN
Sbjct: 79  RCQLSNKRDRSRELIK--AAILAN 100


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 522 TTPIAFLERCLVWLLMEYIPKALXGPE 602
           T  + +LERCL+  L  Y P  L   E
Sbjct: 394 TLEMKYLERCLLETLRMYPPVPLIARE 420


>AF487333-1|AAL93262.1|   80|Apis mellifera integrin betaPS protein.
          Length = 80

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +2

Query: 419 ISEAPKEMTEDIAEPATPYHYEN 487
           +S  PK + E     A PY Y+N
Sbjct: 9   VSTMPKSLKEPCDGCAAPYGYKN 31


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +2

Query: 296 VKNYGATLMKQYGNYCPIISRG 361
           VK YGA L+  YG     ++ G
Sbjct: 393 VKAYGAGLLSAYGELLHALTSG 414


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,134
Number of Sequences: 438
Number of extensions: 3536
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17971191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)