Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_D08
         (470 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical ...    29   2.2  
AC024696-13|AAK84505.1|  346|Caenorhabditis elegans Hypothetical...    29   2.2  
AC006697-3|AAF60392.1|  346|Caenorhabditis elegans Hypothetical ...    29   2.2  
U58758-6|AAO38577.1|  604|Caenorhabditis elegans Hypothetical pr...    28   2.9  
U58758-5|AAL11107.1|  693|Caenorhabditis elegans Hypothetical pr...    28   2.9  
U58758-4|AAK68614.1|  914|Caenorhabditis elegans Hypothetical pr...    28   2.9  
U58758-3|AAK68615.1|  905|Caenorhabditis elegans Hypothetical pr...    28   2.9  
AL021473-2|CAA16304.1|  301|Caenorhabditis elegans Hypothetical ...    27   6.8  
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical...    27   9.0  

>AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical
           protein Y102A11A.3 protein.
          Length = 1571

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 280 NDCDSCSEEVIEEHSLNTDTNNLQIEE 360
           N  DSC  E I+ H L++  NNL+I E
Sbjct: 829 NVIDSCYHENIQNHVLSSINNNLEIVE 855


>AC024696-13|AAK84505.1|  346|Caenorhabditis elegans Hypothetical
           protein F07B7.1 protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = +1

Query: 274 IENDCDSCSEEVIEEHSLNTDTNNLQIEESGKKKPXGISSVTLRSXNKNQ 423
           +E+ C+    +++ EH ++ D+   Q   S   +  G SS      NK++
Sbjct: 144 VESICNRLETQIMHEHHVDNDSRQAQARRSSSAESTGTSSKGNLQKNKDK 193


>AC006697-3|AAF60392.1|  346|Caenorhabditis elegans Hypothetical
           protein W09B7.1 protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 12/50 (24%), Positives = 24/50 (48%)
 Frame = +1

Query: 274 IENDCDSCSEEVIEEHSLNTDTNNLQIEESGKKKPXGISSVTLRSXNKNQ 423
           +E+ C+    +++ EH ++ D+   Q   S   +  G SS      NK++
Sbjct: 144 VESICNRLETQIMHEHHVDNDSRQAQARRSSSAESTGTSSKGNLQKNKDK 193


>U58758-6|AAO38577.1|  604|Caenorhabditis elegans Hypothetical
           protein ZK1127.9e protein.
          Length = 604

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 111 WCIVYVNNCLLWFFEIPSDKLSRWHIMEACYGR 209
           WC+V+  +  ++F+  PS K S W      YGR
Sbjct: 129 WCVVWTGDDKVFFYN-PSTKCSVWERPPDTYGR 160


>U58758-5|AAL11107.1|  693|Caenorhabditis elegans Hypothetical
           protein ZK1127.9c protein.
          Length = 693

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 111 WCIVYVNNCLLWFFEIPSDKLSRWHIMEACYGR 209
           WC+V+  +  ++F+  PS K S W      YGR
Sbjct: 129 WCVVWTGDDKVFFYN-PSTKCSVWERPPDTYGR 160


>U58758-4|AAK68614.1|  914|Caenorhabditis elegans Hypothetical
           protein ZK1127.9a protein.
          Length = 914

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 111 WCIVYVNNCLLWFFEIPSDKLSRWHIMEACYGR 209
           WC+V+  +  ++F+  PS K S W      YGR
Sbjct: 350 WCVVWTGDDKVFFYN-PSTKCSVWERPPDTYGR 381


>U58758-3|AAK68615.1|  905|Caenorhabditis elegans Hypothetical
           protein ZK1127.9b protein.
          Length = 905

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 111 WCIVYVNNCLLWFFEIPSDKLSRWHIMEACYGR 209
           WC+V+  +  ++F+  PS K S W      YGR
Sbjct: 341 WCVVWTGDDKVFFYN-PSTKCSVWERPPDTYGR 372


>AL021473-2|CAA16304.1|  301|Caenorhabditis elegans Hypothetical
           protein Y20C6A.3 protein.
          Length = 301

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 12/38 (31%), Positives = 25/38 (65%)
 Frame = +1

Query: 277 ENDCDSCSEEVIEEHSLNTDTNNLQIEESGKKKPXGIS 390
           E  CD+ ++++  EH ++   NN QI+++G +KP  ++
Sbjct: 154 EKSCDNENDKI--EHIMHNSLNN-QIQKAGLQKPGDVA 188


>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
            protein Y66D12A.14 protein.
          Length = 2870

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
 Frame = +1

Query: 280  NDCDSCSEEVIEEHSLNTDTNNL-QIEESGKKKPXGISSVTLRSXNKNQDHPHLPNVRXT 456
            ND     E  +E H + +  N + +   +G  K   I ++ L    KN  HP LPN   +
Sbjct: 2531 NDAREHCERYLEPHKIPSTFNGIDKFPLTGNSK---IDTLKLMELVKNLPHPTLPNSLES 2587

Query: 457  GIS 465
             +S
Sbjct: 2588 DLS 2590


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,467,085
Number of Sequences: 27780
Number of extensions: 206388
Number of successful extensions: 452
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)