Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_D06
(559 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19052-1|CAA79496.1| 151|Drosophila melanogaster ribosomal prot... 151 5e-37
X91854-1|CAA62965.1| 151|Drosophila melanogaster ribosomal prot... 151 5e-37
X91853-1|CAA62964.1| 151|Drosophila melanogaster ribosomal prot... 151 5e-37
AY058536-1|AAL13765.1| 151|Drosophila melanogaster LD23958p pro... 151 5e-37
AE014134-1471|ABC65883.1| 151|Drosophila melanogaster CG13389-P... 151 5e-37
AE014134-1470|AAF52649.1| 151|Drosophila melanogaster CG13389-P... 151 5e-37
>Z19052-1|CAA79496.1| 151|Drosophila melanogaster ribosomal protein
S17 protein.
Length = 151
Score = 151 bits (367), Expect = 5e-37
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +3
Query: 297 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 476
IMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLARYYKTKS
Sbjct: 74 IMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKS 133
Query: 477 VLPPNWKYESSTASALVA 530
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 96.7 bits (230), Expect = 2e-20
Identities = 45/60 (75%), Positives = 51/60 (85%)
Frame = +2
Query: 116 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 295
SALPYRR+VP+WLKL ADDVKEQI K G++G QIG++LRDSHGVAQVRFV G KILR
Sbjct: 14 SALPYRRTVPSWLKLNADDVKEQIKKAGQEGSDSLQIGIILRDSHGVAQVRFVNGNKILR 73
Score = 37.1 bits (82), Expect = 0.016
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 76 MGRMHAPGKGISQXGAALPPQCPYLVEIDCRRCKGTNLQTWKEGSHSL 219
MGRMHAPGKGISQ P ++++ K + +EGS SL
Sbjct: 1 MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKAGQEGSDSL 48
>X91854-1|CAA62965.1| 151|Drosophila melanogaster ribosomal protein
S13 protein.
Length = 151
Score = 151 bits (367), Expect = 5e-37
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +3
Query: 297 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 476
IMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLARYYKTKS
Sbjct: 74 IMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKS 133
Query: 477 VLPPNWKYESSTASALVA 530
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 110 bits (265), Expect = 1e-24
Identities = 51/60 (85%), Positives = 56/60 (93%)
Frame = +2
Query: 116 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 295
SALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVRFV G KILR
Sbjct: 14 SALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILR 73
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 76 MGRMHAPGKGISQXGAALP 132
MGRMHAPGKGISQ +ALP
Sbjct: 1 MGRMHAPGKGISQ--SALP 17
>X91853-1|CAA62964.1| 151|Drosophila melanogaster ribosomal protein
S13 protein.
Length = 151
Score = 151 bits (367), Expect = 5e-37
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +3
Query: 297 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 476
IMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLARYYKTKS
Sbjct: 74 IMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKS 133
Query: 477 VLPPNWKYESSTASALVA 530
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 110 bits (265), Expect = 1e-24
Identities = 51/60 (85%), Positives = 56/60 (93%)
Frame = +2
Query: 116 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 295
SALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVRFV G KILR
Sbjct: 14 SALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILR 73
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 76 MGRMHAPGKGISQXGAALP 132
MGRMHAPGKGISQ +ALP
Sbjct: 1 MGRMHAPGKGISQ--SALP 17
>AY058536-1|AAL13765.1| 151|Drosophila melanogaster LD23958p
protein.
Length = 151
Score = 151 bits (367), Expect = 5e-37
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +3
Query: 297 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 476
IMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLARYYKTKS
Sbjct: 74 IMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKS 133
Query: 477 VLPPNWKYESSTASALVA 530
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 110 bits (265), Expect = 1e-24
Identities = 51/60 (85%), Positives = 56/60 (93%)
Frame = +2
Query: 116 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 295
SALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVRFV G KILR
Sbjct: 14 SALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILR 73
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 76 MGRMHAPGKGISQXGAALP 132
MGRMHAPGKGISQ +ALP
Sbjct: 1 MGRMHAPGKGISQ--SALP 17
>AE014134-1471|ABC65883.1| 151|Drosophila melanogaster CG13389-PB,
isoform B protein.
Length = 151
Score = 151 bits (367), Expect = 5e-37
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +3
Query: 297 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 476
IMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLARYYKTKS
Sbjct: 74 IMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKS 133
Query: 477 VLPPNWKYESSTASALVA 530
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 110 bits (265), Expect = 1e-24
Identities = 51/60 (85%), Positives = 56/60 (93%)
Frame = +2
Query: 116 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 295
SALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVRFV G KILR
Sbjct: 14 SALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILR 73
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 76 MGRMHAPGKGISQXGAALP 132
MGRMHAPGKGISQ +ALP
Sbjct: 1 MGRMHAPGKGISQ--SALP 17
>AE014134-1470|AAF52649.1| 151|Drosophila melanogaster CG13389-PA,
isoform A protein.
Length = 151
Score = 151 bits (367), Expect = 5e-37
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +3
Query: 297 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 476
IMK++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLARYYKTKS
Sbjct: 74 IMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKS 133
Query: 477 VLPPNWKYESSTASALVA 530
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 110 bits (265), Expect = 1e-24
Identities = 51/60 (85%), Positives = 56/60 (93%)
Frame = +2
Query: 116 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 295
SALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGVAQVRFV G KILR
Sbjct: 14 SALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILR 73
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 76 MGRMHAPGKGISQXGAALP 132
MGRMHAPGKGISQ +ALP
Sbjct: 1 MGRMHAPGKGISQ--SALP 17
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,621,097
Number of Sequences: 53049
Number of extensions: 457148
Number of successful extensions: 1051
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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