Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_D04
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical pr... 167 8e-42
Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical pr... 28 5.0
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 5.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 5.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 5.0
Z81077-4|CAB03071.3| 618|Caenorhabditis elegans Hypothetical pr... 24 5.6
AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical... 28 6.6
AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical... 28 6.6
AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical ... 28 6.6
AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical... 28 6.6
AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical... 28 6.6
AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical ... 28 6.6
AF099913-8|ABB51194.1| 301|Caenorhabditis elegans Hypothetical ... 28 6.6
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 28 6.6
Z81514-2|CAB04189.1| 283|Caenorhabditis elegans Hypothetical pr... 27 8.7
U50199-4|AAA91264.2| 142|Caenorhabditis elegans Abnormal cell l... 27 8.7
>Z48334-1|CAA88308.1| 214|Caenorhabditis elegans Hypothetical
protein F10B5.1 protein.
Length = 214
Score = 167 bits (405), Expect = 8e-42
Identities = 74/92 (80%), Positives = 81/92 (88%)
Frame = +1
Query: 136 IFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLH 315
IFDLG KRA VD FP CVH++S+E E LSSEALEA RIC NKY+VKNCGKD FH+R+R H
Sbjct: 33 IFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAARICANKYMVKNCGKDGFHLRVRKH 92
Query: 316 PFHVIRINKMLSCAGADRLQTGMRGAFGKPQG 411
PFHV RINKMLSCAGADRLQTGMRGA+GKPQG
Sbjct: 93 PFHVTRINKMLSCAGADRLQTGMRGAYGKPQG 124
Score = 89.8 bits (213), Expect = 1e-18
Identities = 43/80 (53%), Positives = 57/80 (71%)
Frame = +2
Query: 407 RGTVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGRQKIYVSKKWGFTKYERDEFE 586
+G VARV IG + S+R + IEA RRAKFKFPGRQ I S+KWGFTK++R+++E
Sbjct: 123 QGLVARVDIGDILFSMRIKEGNVKHAIEAFRRAKFKFPGRQIIVSSRKWGFTKWDREDYE 182
Query: 587 KLREEGRLANDGCIVQYRPE 646
++R EGRL +DG VQ + E
Sbjct: 183 RMRAEGRLRSDGVGVQLQRE 202
Score = 74.1 bits (174), Expect = 8e-14
Identities = 31/37 (83%), Positives = 31/37 (83%)
Frame = +3
Query: 39 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRYLRFG 149
MGRRPARCYRY KNKPYPKSRFCRGVPD KIR G
Sbjct: 1 MGRRPARCYRYIKNKPYPKSRFCRGVPDAKIRIFDLG 37
>Z46791-1|CAA86761.1| 476|Caenorhabditis elegans Hypothetical
protein C09G5.2 protein.
Length = 476
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 404 GLPNAPRIPVWSLSAPA 354
G PN+P +P+W LS P+
Sbjct: 232 GFPNSPLLPIWLLSYPS 248
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 152 LPKSKIXDLGIRYTPTEPRFRIRFIFAVPVA 60
L ++ I D+ + TP +P+ +F+F VPVA
Sbjct: 598 LIETAISDILLHRTPIDPQADYKFVFEVPVA 628
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 152 LPKSKIXDLGIRYTPTEPRFRIRFIFAVPVA 60
L ++ I D+ + TP +P+ +F+F VPVA
Sbjct: 598 LIETAISDILLHRTPIDPQADYKFVFEVPVA 628
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -1
Query: 152 LPKSKIXDLGIRYTPTEPRFRIRFIFAVPVA 60
L ++ I D+ + TP +P+ +F+F VPVA
Sbjct: 181 LIETAISDILLHRTPIDPQADYKFVFEVPVA 211
>Z81077-4|CAB03071.3| 618|Caenorhabditis elegans Hypothetical
protein F36A2.4 protein.
Length = 618
Score = 24.2 bits (50), Expect(2) = 5.6
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +3
Query: 441 PSCPCALVTGGRHRSSRLCAVPSSSSPDVKRSTYQRSGVSQSMNVMSLRSCVKRAASLMT 620
P C +V+ + A P S PD+ + R ++ V LR +M+
Sbjct: 391 PPSDCQVVSTSAYSVRLAWAPPFSPDPDLTYNIRYRLKHNEDAKVRELRGIKGNTVEIMS 450
Query: 621 AALCS 635
CS
Sbjct: 451 VDSCS 455
Score = 22.2 bits (45), Expect(2) = 5.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 267 RKELRKGSVPYPHETSPFPRYP 332
+KE R+GS P+E F R P
Sbjct: 367 KKEKRRGSHVLPNEKFMFARLP 388
>AL021488-11|CAN86609.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 468 LSLERTDMMGCPMRTRATVPLRLAKRTTHPSLEPISSSA**HFIDADNVERVKSHADME 292
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021488-10|CAA16368.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 468 LSLERTDMMGCPMRTRATVPLRLAKRTTHPSLEPISSSA**HFIDADNVERVKSHADME 292
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021488-9|CAC42378.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 468 LSLERTDMMGCPMRTRATVPLRLAKRTTHPSLEPISSSA**HFIDADNVERVKSHADME 292
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021483-11|CAN86637.1| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6c protein.
Length = 1245
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 468 LSLERTDMMGCPMRTRATVPLRLAKRTTHPSLEPISSSA**HFIDADNVERVKSHADME 292
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021483-10|CAA16349.2| 1247|Caenorhabditis elegans Hypothetical
protein Y45F10A.6a protein.
Length = 1247
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 468 LSLERTDMMGCPMRTRATVPLRLAKRTTHPSLEPISSSA**HFIDADNVERVKSHADME 292
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AL021483-9|CAC42374.2| 1245|Caenorhabditis elegans Hypothetical
protein Y45F10A.6b protein.
Length = 1245
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -3
Query: 468 LSLERTDMMGCPMRTRATVPLRLAKRTTHPSLEPISSSA**HFIDADNVERVKSHADME 292
L++E TD++G P RT+A + R + P E + A V HA+ME
Sbjct: 962 LAIEATDLLGTPKRTQAQLQERRSNSVDIPRKESDQNLADSLRTRCSTSSAVMIHANME 1020
>AF099913-8|ABB51194.1| 301|Caenorhabditis elegans Hypothetical
protein C29F9.4 protein.
Length = 301
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 557 FTKYERDEFEKLREEGRLANDGCIVQYR 640
F K +RDEFE++R + LA + I Y+
Sbjct: 136 FFKSQRDEFERIRYDPELAEEHFIEAYK 163
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 29 KDHHGAPASEMLPVLQK*TVSEIEVLSGCT*SQDPXSSIWVRRERPLTTFHCACTWCPTN 208
K G+P+S+ P+ E + G +D W RR+ L ++ AC+WC N
Sbjct: 306 KKDTGSPSSKNAPLFSPSKWGEKRIAVGVKKMEDA----WKRRD--LELYNEACSWCEKN 359
Query: 209 MN 214
++
Sbjct: 360 LS 361
>Z81514-2|CAB04189.1| 283|Caenorhabditis elegans Hypothetical
protein F26F2.3 protein.
Length = 283
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = -2
Query: 235 PKPLSSAVHIRRTPSARTVESRQRSLSSYPNRRXRILGSGTPRQNLD 95
P P + I + A+ V+ + R S+ R I+G TP Q+++
Sbjct: 119 PYPTGVCLKIPYSAKAKNVQIKMRRSKSHNYREADIVGLNTPNQHIE 165
>U50199-4|AAA91264.2| 142|Caenorhabditis elegans Abnormal cell
lineage protein 32 protein.
Length = 142
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 426 FALDSPSCPCALVTGGRHRSSRLCAVPSSSSPDVKR 533
F+LDSP+ P +L GG + C + SP + R
Sbjct: 36 FSLDSPNYPDSLSNGGGKDDKKKCRRYKTPSPQLLR 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,561,435
Number of Sequences: 27780
Number of extensions: 373263
Number of successful extensions: 1095
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1094
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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