Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_D01
         (443 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0169 - 1170614-1172098                                           31   0.55 
08_01_0777 - 7542478-7544988                                           28   3.9  

>05_01_0169 - 1170614-1172098
          Length = 494

 Score = 30.7 bits (66), Expect = 0.55
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
 Frame = -1

Query: 251 WEDPDESSALEGDPVDFSALSMASMHCS---LRDLSASIS*INLCNDLNLSCTCCAATSA 81
           W D DE     GD  DF+ L+  S H        + A++  +       LSC CC   +A
Sbjct: 141 WVDADELLPFRGDGGDFALLAGQSAHAMPALTASVDAALGEVARRVAAGLSCCCCCDGAA 200

Query: 80  V 78
           V
Sbjct: 201 V 201


>08_01_0777 - 7542478-7544988
          Length = 836

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = -2

Query: 265 AAKLVGKILMNHQHSKEIL*IFQLSVWHLCTVHCETSPLL 146
           AAK +G +L   Q  KE L I   ++W++    C+  P L
Sbjct: 359 AAKTLGSVLFGKQDVKEWLRIKDANLWNIEQNKCDILPAL 398


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,388,713
Number of Sequences: 37544
Number of extensions: 156837
Number of successful extensions: 440
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)