Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_D01
         (443 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014636-1|AAT27260.1|  121|Drosophila melanogaster RH55624p pro...    58   5e-09
AE013599-3173|AAF46707.2|  289|Drosophila melanogaster CG30390-P...    58   5e-09
BT003465-1|AAO39468.1|  184|Drosophila melanogaster RH01388p pro...    27   8.7  

>BT014636-1|AAT27260.1|  121|Drosophila melanogaster RH55624p
           protein.
          Length = 121

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 42/119 (35%), Positives = 60/119 (50%)
 Frame = +1

Query: 70  MPLTADVAAQQVQERLRSLHRLIYDIEAERSRNEQCIDAILRAEXXXXXXXXXXXXXXXX 249
           MPLTA+ AAQQ+Q+RL+ + + I++++ ER R E  I +++R+                 
Sbjct: 1   MPLTAESAAQQIQDRLKDIQQNIHNVDEERRRAENSIASLVRS---------------LH 45

Query: 250 XXXXXXXXXXXXGLTXXXXXXXXXXXXXXXIYEIRAIKNERRIQARHAGNKGDDRLRGA 426
                        LT               I+EIR+I+NERRIQAR+AGNK   R RGA
Sbjct: 46  ATNQKVKPLLKASLTEAAQEEATIRAALAKIHEIRSIRNERRIQARNAGNKEAIR-RGA 103


>AE013599-3173|AAF46707.2|  289|Drosophila melanogaster CG30390-PA
           protein.
          Length = 289

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 42/119 (35%), Positives = 60/119 (50%)
 Frame = +1

Query: 70  MPLTADVAAQQVQERLRSLHRLIYDIEAERSRNEQCIDAILRAEXXXXXXXXXXXXXXXX 249
           MPLTA+ AAQQ+Q+RL+ + + I++++ ER R E  I +++R+                 
Sbjct: 1   MPLTAESAAQQIQDRLKDIQQNIHNVDEERRRAENSIASLVRS---------------LH 45

Query: 250 XXXXXXXXXXXXGLTXXXXXXXXXXXXXXXIYEIRAIKNERRIQARHAGNKGDDRLRGA 426
                        LT               I+EIR+I+NERRIQAR+AGNK   R RGA
Sbjct: 46  ATNQKVKPLLKASLTEAAQEEATIRAALAKIHEIRSIRNERRIQARNAGNKEAIR-RGA 103


>BT003465-1|AAO39468.1|  184|Drosophila melanogaster RH01388p
           protein.
          Length = 184

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -1

Query: 251 WEDPDESSALEGDPVDFSALSMASMHCSLRDLSASIS 141
           WE+  +  A  G P DF  LSM S   S+   SA+ S
Sbjct: 55  WENVKKGQARTGKPTDFGILSMPSGLISIYGPSAAPS 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,232,592
Number of Sequences: 53049
Number of extensions: 285020
Number of successful extensions: 742
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)