Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_C17
(650 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0219 - 1651833-1651987,1652172-1652471,1652889-1652967,165... 52 3e-07
11_01_0217 - 1698721-1698875,1699122-1699421,1699840-1699918,169... 52 3e-07
05_01_0120 - 828834-831143 50 2e-06
01_03_0205 + 13777918-13778015,13778402-13778624,13779022-137791... 50 2e-06
01_03_0017 + 11677029-11677100,11677992-11678030,11678169-116783... 46 2e-05
10_08_0930 - 21641818-21642240,21642731-21642820,21642902-216429... 46 3e-05
06_01_0372 + 2684208-2684390,2684867-2684968,2685197-2685290,268... 44 8e-05
05_06_0131 - 25888434-25888931,25889105-25889155,25889249-258893... 44 1e-04
01_06_0649 + 30861946-30862179,30862702-30862824,30863104-308631... 43 2e-04
11_01_0077 - 602192-602395,602477-602647,603161-603366,605457-60... 38 0.007
12_01_0078 - 639421-639624,639706-639876,640392-640597,640985-64... 36 0.021
06_02_0081 - 11527339-11527652,11528166-11528272,11528361-115284... 33 0.15
12_02_0881 - 23970143-23970433,23970814-23971116,23971490-239720... 29 4.2
03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009 28 5.6
02_05_0352 + 28240913-28241362 28 5.6
>12_01_0219 -
1651833-1651987,1652172-1652471,1652889-1652967,
1653047-1653111,1653236-1653288,1653666-1654084
Length = 356
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/69 (39%), Positives = 42/69 (60%)
Frame = +3
Query: 444 ISYPWLDTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWXKMT 623
++ P DT ++L +++ D I+E G V LVHC AGVSRS T+ +AYL++ + +
Sbjct: 97 MAVPLRDTEEENLLDHLEPCLDFIDEGRKEGNV-LVHCFAGVSRSATIIVAYLMRTEQKS 155
Query: 624 LRDAYHYLK 650
L +A LK
Sbjct: 156 LEEALESLK 164
>11_01_0217 -
1698721-1698875,1699122-1699421,1699840-1699918,
1699998-1700062,1700187-1700239,1700654-1701072
Length = 356
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/69 (39%), Positives = 42/69 (60%)
Frame = +3
Query: 444 ISYPWLDTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWXKMT 623
++ P DT ++L +++ D I+E G V LVHC AGVSRS T+ +AYL++ + +
Sbjct: 97 MAVPLRDTEEENLLDHLEPCLDFIDEGRKEGNV-LVHCFAGVSRSATIIVAYLMRTEQKS 155
Query: 624 LRDAYHYLK 650
L +A LK
Sbjct: 156 LEEALESLK 164
>05_01_0120 - 828834-831143
Length = 769
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 456 WL-DTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWXKMTLRD 632
WL D+P D+ + V D +V GG V VHC GVSRS +L +AYL+ + D
Sbjct: 196 WLQDSPTEDITSILYDVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDD 255
Query: 633 AYHYLK 650
A+ +K
Sbjct: 256 AFQLVK 261
>01_03_0205 +
13777918-13778015,13778402-13778624,13779022-13779198,
13779277-13779437,13779520-13780519,13780923-13781069,
13781149-13781376,13781471-13781628,13781807-13782161
Length = 848
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/63 (42%), Positives = 36/63 (57%)
Frame = +3
Query: 462 DTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWXKMTLRDAYH 641
D N+D+ +D I+ V G VLVHC G SRS T+ LAYL+ K TL +A++
Sbjct: 681 DDENADISDVFQDASDFIDYVQHLHGKVLVHCFEGKSRSATVVLAYLMLRKKFTLLEAWN 740
Query: 642 YLK 650
LK
Sbjct: 741 MLK 743
>01_03_0017 +
11677029-11677100,11677992-11678030,11678169-11678341,
11679068-11679284,11679518-11679688,11679781-11679941,
11680025-11681069,11681320-11681466,11681547-11681774,
11681863-11682020,11682124-11682493
Length = 926
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +3
Query: 462 DTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWXKMTLRDAYH 641
D ++++ + +D + V GG VLVHC G SRS T+ LAYL+ +TL A++
Sbjct: 754 DDDDANISDLFEEASDYFDHVDHVGGKVLVHCFEGKSRSATIVLAYLMLRKGLTLAKAWN 813
Query: 642 YLK 650
LK
Sbjct: 814 LLK 816
>10_08_0930 -
21641818-21642240,21642731-21642820,21642902-21642984,
21643512-21643605,21644366-21644488,21644893-21645168
Length = 362
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +3
Query: 498 RVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWXKMTLRDAYHYLK 650
R AD I+ G + VHC AG RS T+ L YLV++ +MT +AY +++
Sbjct: 158 RAADFIHRNALCGKLTYVHCKAGRGRSTTVVLCYLVQYKQMTPAEAYEHVR 208
>06_01_0372 +
2684208-2684390,2684867-2684968,2685197-2685290,
2685450-2685532,2685684-2685773,2686931-2687173
Length = 264
Score = 44.4 bits (100), Expect = 8e-05
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +3
Query: 438 RGISY---PWLDTPNSDMLPYMDRVADLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVK 608
RGI + P D + L + R D I+ + G + +HC AG RS T+ L YLVK
Sbjct: 97 RGIDHLVIPTRDYMFAPSLVDISRAVDFIHRNASCGRMTYIHCKAGRGRSTTIVLCYLVK 156
Query: 609 WXKMTLRDAYHYLK 650
+ MT A+ +++
Sbjct: 157 YKNMTPSTAFEHVR 170
>05_06_0131 -
25888434-25888931,25889105-25889155,25889249-25889331,
25889733-25889826,25890188-25890310,25890909-25891154
Length = 364
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Frame = +3
Query: 423 PKITYRGISYPWLDTPNSDML--PYMDRVA---DLINEVVTNGGVVLVHCVAGVSRSVTL 587
P Y+ L+ P D L P ++ + D I+ + GG VHC AG RS T+
Sbjct: 118 PTSLYQAHGINHLEIPTRDYLFAPSLEDICQAVDFIHRNASQGGSTYVHCKAGRGRSTTI 177
Query: 588 CLAYLVKWXKMT 623
L YL+K+ MT
Sbjct: 178 VLCYLIKYRNMT 189
>01_06_0649 +
30861946-30862179,30862702-30862824,30863104-30863197,
30863819-30863901,30863984-30864073,30864176-30864562,
30864903-30864991,30867801-30867907,30868431-30868822
Length = 532
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +3
Query: 507 DLINEVVTNGGVVLVHCVAGVSRSVTLCLAYLVKWXKMTLRDAYHYLK 650
D I+ + GG+ VHC AG RS T+ L YL+K+ M+ A +++
Sbjct: 147 DFIHRNASEGGITYVHCKAGRGRSTTIVLCYLIKYRSMSPEAALDHVR 194
>11_01_0077 -
602192-602395,602477-602647,603161-603366,605457-605682
Length = 268
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +3
Query: 405 QNCLHRPK-ITYRGISYPWLDTPNSDMLPYMDRVADLINEVVTNG-GVVLVHCVAGVSRS 578
Q ++R K + + I P +D + + + + ++ G G V VHC AG+ R+
Sbjct: 127 QTVVNRCKELGIKHIRRPAVDFDPDSLRTQLPKAVSSLEWAISEGKGRVYVHCTAGLGRA 186
Query: 579 VTLCLAYLVKWXKMTLRDAYHYL 647
+ +AY+ + M LR AY L
Sbjct: 187 PAVAIAYMFWFENMDLRTAYEKL 209
>12_01_0078 -
639421-639624,639706-639876,640392-640597,640985-641100,
641669-641855,642104-642338
Length = 372
Score = 36.3 bits (80), Expect = 0.021
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +3
Query: 405 QNCLHRPK-ITYRGISYPWLDTPNSDMLPYMDRVADLINEVVTNG-GVVLVHCVAGVSRS 578
Q ++R K + + I P +D + + + + ++ G G V VHC AG+ R+
Sbjct: 231 QTVVNRCKELGIKHIRRPAVDFDPDSLRTQLPKAVASLEWAISEGKGRVYVHCTAGLGRA 290
Query: 579 VTLCLAYLVKWXKMTLRDAYHYL 647
+ +AY+ + M L+ AY L
Sbjct: 291 PAVAIAYMFWFENMNLKTAYEKL 313
>06_02_0081 -
11527339-11527652,11528166-11528272,11528361-11528418,
11529240-11529267,11530233-11530499
Length = 257
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 543 VLVHCVAGVSRSVTLCLAYLVKWXKMTLRDAYHYLK 650
VLVHC++G SRS +A+L+K L + ++K
Sbjct: 108 VLVHCMSGKSRSAAFVIAFLMKTKGWRLSQCFQWVK 143
>12_02_0881 -
23970143-23970433,23970814-23971116,23971490-23972077,
23972606-23972761,23972852-23972910,23974294-23974561
Length = 554
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 429 ITYRGISYPWLDTPNSDMLPYMDRVADLINEVVTN 533
I Y G S PWLD + P+ R + NE + N
Sbjct: 512 IHYNGQSKPWLDIGFKHLQPFWTRHVNYSNEFIRN 546
>03_06_0186 - 32197461-32197751,32204940-32205548,32205603-32207009
Length = 768
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 596 SQTECH*SGHSGDAMNQHHPSVCDHLINKVSNPIHIGEHI 477
S +C GHS +HH D ++ V++P+H H+
Sbjct: 417 SPRQCDRGGHSRHGGRRHHAGATD--VDNVTDPVHPEPHL 454
>02_05_0352 + 28240913-28241362
Length = 149
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 281 SSLINFCVSTTTVGSFSRPTLATLSPTVKT 192
S L C + T++ SRPT+AT S VKT
Sbjct: 69 SILARTCSTWTSLSRTSRPTMATTSGVVKT 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,891,186
Number of Sequences: 37544
Number of extensions: 337964
Number of successful extensions: 700
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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