Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_C17
         (650 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.84 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.5  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   4.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   7.8  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.8  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 256 DTQKLIREELNRGCP 300
           D QK +REE+N  CP
Sbjct: 325 DVQKKLREEINTFCP 339


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 454 GYEMPRYVIFG 422
           G+ MPRY +FG
Sbjct: 525 GHRMPRYCLFG 535


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 454 GYEMPRYVIFG 422
           G+ MPRY +FG
Sbjct: 525 GHRMPRYCLFG 535


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 572 GHSGDAMNQHHPS 534
           GHSG + + HH S
Sbjct: 396 GHSGQSSSHHHGS 408


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 454 GYEMPRYVIFG 422
           G +MPRY +FG
Sbjct: 532 GLKMPRYCLFG 542


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,318
Number of Sequences: 438
Number of extensions: 3161
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)