Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_C13
(513 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 29 2.6
U64849-2|AAC48051.1| 411|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 27 6.0
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 27 6.0
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 27 6.0
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 27 6.0
AF039051-13|AAB94269.1| 300|Caenorhabditis elegans Hypothetical... 27 6.0
U28929-1|AAN63410.1| 418|Caenorhabditis elegans Hypothetical pr... 27 7.9
CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical... 27 7.9
CU457741-12|CAM36353.1| 157|Caenorhabditis elegans Hypothetical... 27 7.9
CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical... 27 7.9
AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidas... 27 7.9
AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidas... 27 7.9
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 321 GNEMGYYSYNDSC*NGEYKESYA 253
GNEM Y + C +GE E YA
Sbjct: 186 GNEMALLGYREKCESGEINEEYA 208
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 321 GNEMGYYSYNDSC*NGEYKESYA 253
GNEM Y + C +GE E YA
Sbjct: 186 GNEMALLGYREKCESGEINEEYA 208
>U64849-2|AAC48051.1| 411|Caenorhabditis elegans Hypothetical
protein K04A8.5 protein.
Length = 411
Score = 27.9 bits (59), Expect = 4.5
Identities = 9/32 (28%), Positives = 21/32 (65%)
Frame = -2
Query: 305 IIPTMIAVRMANIKKATQIQWEMNTPPLLLYW 210
+IP +I + ++N K+ +++ ++TP L+ W
Sbjct: 12 MIPLLIILLLSNYSKSVDLEFYLDTPELIKSW 43
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 334 SNKSTEYWNEAEPFGVSDKP 393
S+ EYWNE+EP + +P
Sbjct: 408 SSYQREYWNESEPLSYNSRP 427
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 334 SNKSTEYWNEAEPFGVSDKP 393
S+ EYWNE+EP + +P
Sbjct: 408 SSYQREYWNESEPLSYNSRP 427
>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 334 SNKSTEYWNEAEPFGVSDKP 393
S+ EYWNE+EP + +P
Sbjct: 67 SSYQREYWNESEPLSYNSRP 86
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 334 SNKSTEYWNEAEPFGVSDKP 393
S+ EYWNE+EP + +P
Sbjct: 408 SSYQREYWNESEPLSYNSRP 427
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 334 SNKSTEYWNEAEPFGVSDKP 393
S+ EYWNE+EP + +P
Sbjct: 408 SSYQREYWNESEPLSYNSRP 427
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 334 SNKSTEYWNEAEPFGVSDKP 393
S+ EYWNE+EP + +P
Sbjct: 408 SSYQREYWNESEPLSYNSRP 427
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 334 SNKSTEYWNEAEPFGVSDKP 393
S+ EYWNE+EP + +P
Sbjct: 408 SSYQREYWNESEPLSYNSRP 427
>Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical
protein T07F10.1b protein.
Length = 976
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 400 DLXLPTSVTPSFYRLKINAHLDKANFSGD 486
+L LPTSV+P Y+L + +L ++ D
Sbjct: 71 ELRLPTSVSPISYQLTVKTYLPGYGYTAD 99
>Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical
protein T07F10.1a protein.
Length = 988
Score = 27.5 bits (58), Expect = 6.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 400 DLXLPTSVTPSFYRLKINAHLDKANFSGD 486
+L LPTSV+P Y+L + +L ++ D
Sbjct: 83 ELRLPTSVSPISYQLTVKTYLPGYGYTAD 111
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 334 SNKSTEYWNEAEPFGVSDKP 393
S+ EYWNE+EP + +P
Sbjct: 408 SSYQREYWNESEPLSYNSRP 427
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 334 SNKSTEYWNEAEPFGVSDKP 393
S+ EYWNE+EP + +P
Sbjct: 408 SSYQREYWNESEPLSYNSRP 427
>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 334 SNKSTEYWNEAEPFGVSDKP 393
S+ EYWNE+EP + +P
Sbjct: 67 SSYQREYWNESEPLSYNSRP 86
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical
protein ZK524.2a protein.
Length = 1813
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 334 SNKSTEYWNEAEPFGVSDKP 393
S+ EYWNE+EP + +P
Sbjct: 408 SSYQREYWNESEPLSYNSRP 427
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 334 SNKSTEYWNEAEPFGVSDKP 393
S+ EYWNE+EP + +P
Sbjct: 408 SSYQREYWNESEPLSYNSRP 427
>AF039051-13|AAB94269.1| 300|Caenorhabditis elegans Hypothetical
protein C14C6.13 protein.
Length = 300
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -2
Query: 380 TPNGSASFQYSVDLFDIV*KVTKWAIIPTMIAVRMANIKKATQIQ 246
T NGS SF S+DL + V W + T++ M++ + I+
Sbjct: 159 TKNGSKSFAISIDLIRTLVDVDGWILTDTVLPGPMSSQNELDNIR 203
>U28929-1|AAN63410.1| 418|Caenorhabditis elegans Hypothetical
protein F09C12.2 protein.
Length = 418
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -2
Query: 431 LGVTDVGSXRSGDGLSDTPNGSASFQYSVDLFDIV*KVTKWAIIPTMI 288
L + D G RSG TPN S + S DL V T W P ++
Sbjct: 183 LKIADFGMSRSGPSTKTTPNTSPNAHISGDLSQYV--STLWYRAPEIL 228
>CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical
protein C42C1.11c protein.
Length = 608
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 421 VTPSFYRLKINAHLDKANFSGDVHITL 501
VT S Y LK +K + +GDV ITL
Sbjct: 18 VTVSHYALKWKVDFEKKHIAGDVSITL 44
>CU457741-12|CAM36353.1| 157|Caenorhabditis elegans Hypothetical
protein C42C1.11b protein.
Length = 157
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 421 VTPSFYRLKINAHLDKANFSGDVHITL 501
VT S Y LK +K + +GDV ITL
Sbjct: 18 VTVSHYALKWKVDFEKKHIAGDVSITL 44
>CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical
protein C42C1.11a protein.
Length = 609
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 421 VTPSFYRLKINAHLDKANFSGDVHITL 501
VT S Y LK +K + +GDV ITL
Sbjct: 18 VTVSHYALKWKVDFEKKHIAGDVSITL 44
>AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 421 VTPSFYRLKINAHLDKANFSGDVHITL 501
VT S Y LK +K + +GDV ITL
Sbjct: 18 VTVSHYALKWKVDFEKKHIAGDVSITL 44
>AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 421 VTPSFYRLKINAHLDKANFSGDVHITL 501
VT S Y LK +K + +GDV ITL
Sbjct: 18 VTVSHYALKWKVDFEKKHIAGDVSITL 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,843,616
Number of Sequences: 27780
Number of extensions: 236311
Number of successful extensions: 617
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -