BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_C12
(316 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U84213-1|AAB58540.1| 113|Homo sapiens defender against death 1 ... 107 9e-24
D15057-1|BAA03650.1| 113|Homo sapiens DAD-1 protein. 107 9e-24
CR542204-1|CAG47001.1| 113|Homo sapiens DAD1 protein. 107 9e-24
CR407682-1|CAG28610.1| 113|Homo sapiens DAD1 protein. 107 9e-24
BC007403-1|AAH07403.1| 113|Homo sapiens defender against cell d... 107 9e-24
AY259117-1|AAO74827.1| 113|Homo sapiens defender against cell d... 107 9e-24
AK223129-1|BAD96849.1| 113|Homo sapiens defender against cell d... 107 9e-24
BC009798-1|AAH09798.1| 113|Homo sapiens defender against cell d... 104 5e-23
BC098410-1|AAH98410.1| 910|Homo sapiens transmembrane protein 1... 32 0.31
AB125267-1|BAD17859.1| 913|Homo sapiens integral membrane prote... 29 2.9
U24055-1|AAB50277.1| 427|Homo sapiens inward rectifier K+ chann... 28 6.6
U22413-1|AAA64282.1| 427|Homo sapiens inward rectifier potassiu... 28 6.6
U16861-1|AAA91781.1| 427|Homo sapiens inward rectifying potassi... 28 6.6
U12507-1|AAC50072.1| 427|Homo sapiens cardiac inward rectifier ... 28 6.6
AF153820-1|AAF73241.1| 427|Homo sapiens inwardly-rectifying pot... 28 6.6
AF153819-1|AAF73242.1| 427|Homo sapiens inwardly-rectifying pot... 28 6.6
AF021139-1|AAB88797.1| 427|Homo sapiens inward rectifier potass... 28 6.6
AF011904-1|AAC39555.1| 427|Homo sapiens inwardly rectifying pot... 28 6.6
>U84213-1|AAB58540.1| 113|Homo sapiens defender against death 1
protein protein.
Length = 113
Score = 107 bits (256), Expect = 9e-24
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +2
Query: 74 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFIS 253
+S+ +VI + +EY + TP++LK++DAYL YI LT +QFGYC LVGTFPFN FLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 254 TVSCFVLGVCLRLQLIQKXK 313
V F+L VCLR+Q+ + K
Sbjct: 63 CVGSFILAVCLRIQINPQNK 82
>D15057-1|BAA03650.1| 113|Homo sapiens DAD-1 protein.
Length = 113
Score = 107 bits (256), Expect = 9e-24
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +2
Query: 74 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFIS 253
+S+ +VI + +EY + TP++LK++DAYL YI LT +QFGYC LVGTFPFN FLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 254 TVSCFVLGVCLRLQLIQKXK 313
V F+L VCLR+Q+ + K
Sbjct: 63 CVGSFILAVCLRIQINPQNK 82
>CR542204-1|CAG47001.1| 113|Homo sapiens DAD1 protein.
Length = 113
Score = 107 bits (256), Expect = 9e-24
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +2
Query: 74 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFIS 253
+S+ +VI + +EY + TP++LK++DAYL YI LT +QFGYC LVGTFPFN FLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 254 TVSCFVLGVCLRLQLIQKXK 313
V F+L VCLR+Q+ + K
Sbjct: 63 CVGSFILAVCLRIQINPQNK 82
>CR407682-1|CAG28610.1| 113|Homo sapiens DAD1 protein.
Length = 113
Score = 107 bits (256), Expect = 9e-24
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +2
Query: 74 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFIS 253
+S+ +VI + +EY + TP++LK++DAYL YI LT +QFGYC LVGTFPFN FLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 254 TVSCFVLGVCLRLQLIQKXK 313
V F+L VCLR+Q+ + K
Sbjct: 63 CVGSFILAVCLRIQINPQNK 82
>BC007403-1|AAH07403.1| 113|Homo sapiens defender against cell
death 1 protein.
Length = 113
Score = 107 bits (256), Expect = 9e-24
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +2
Query: 74 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFIS 253
+S+ +VI + +EY + TP++LK++DAYL YI LT +QFGYC LVGTFPFN FLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 254 TVSCFVLGVCLRLQLIQKXK 313
V F+L VCLR+Q+ + K
Sbjct: 63 CVGSFILAVCLRIQINPQNK 82
>AY259117-1|AAO74827.1| 113|Homo sapiens defender against cell
death 1 protein.
Length = 113
Score = 107 bits (256), Expect = 9e-24
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +2
Query: 74 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFIS 253
+S+ +VI + +EY + TP++LK++DAYL YI LT +QFGYC LVGTFPFN FLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 254 TVSCFVLGVCLRLQLIQKXK 313
V F+L VCLR+Q+ + K
Sbjct: 63 CVGSFILAVCLRIQINPQNK 82
>AK223129-1|BAD96849.1| 113|Homo sapiens defender against cell
death 1 variant protein.
Length = 113
Score = 107 bits (256), Expect = 9e-24
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +2
Query: 74 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFIS 253
+S+ +VI + +EY + TP++LK++DAYL YI LT +QFGYC LVGTFPFN FLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 254 TVSCFVLGVCLRLQLIQKXK 313
V F+L VCLR+Q+ + K
Sbjct: 63 CVGSFILAVCLRIQINPQNK 82
>BC009798-1|AAH09798.1| 113|Homo sapiens defender against cell
death 1 protein.
Length = 113
Score = 104 bits (250), Expect = 5e-23
Identities = 45/80 (56%), Positives = 60/80 (75%)
Frame = +2
Query: 74 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFIS 253
+S+ +VI + +EY + P++LK++DAYL YI LT +QFGYC LVGTFPFN FLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSIPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 254 TVSCFVLGVCLRLQLIQKXK 313
V F+L VCLR+Q+ + K
Sbjct: 63 CVGSFILAVCLRIQINPQNK 82
>BC098410-1|AAH98410.1| 910|Homo sapiens transmembrane protein 16F
protein.
Length = 910
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 68 KMSSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCL-VGTFPFNPFLS 241
++S + P+ Q+Y + KL LFY +L +IQFG+ L V +FP P L+
Sbjct: 638 RVSGSEKITPRWEQDYHLQPMGKLG-----LFYEYLEMIIQFGFVTLFVASFPLAPLLA 691
>AB125267-1|BAD17859.1| 913|Homo sapiens integral membrane protein
GDD1 protein.
Length = 913
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 158 LFYIFLTAVIQFGYCCL-VGTFPFNPFLS 241
LFY +L V QFG+ L V +FP P L+
Sbjct: 669 LFYEYLETVTQFGFVTLFVASFPLAPLLA 697
>U24055-1|AAB50277.1| 427|Homo sapiens inward rectifier K+ channel
protein protein.
Length = 427
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 152 AYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFISTVSCFV 271
A+LF I I +G+ C+ P F+ F S V C +
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCII 171
>U22413-1|AAA64282.1| 427|Homo sapiens inward rectifier potassium
channel protein.
Length = 427
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 152 AYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFISTVSCFV 271
A+LF I I +G+ C+ P F+ F S V C +
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCII 171
>U16861-1|AAA91781.1| 427|Homo sapiens inward rectifying potassium
channel protein.
Length = 427
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 152 AYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFISTVSCFV 271
A+LF I I +G+ C+ P F+ F S V C +
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCII 171
>U12507-1|AAC50072.1| 427|Homo sapiens cardiac inward rectifier
potassium channel protein.
Length = 427
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 152 AYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFISTVSCFV 271
A+LF I I +G+ C+ P F+ F S V C +
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCII 171
>AF153820-1|AAF73241.1| 427|Homo sapiens inwardly-rectifying
potassium channel Kir2.1 protein.
Length = 427
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 152 AYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFISTVSCFV 271
A+LF I I +G+ C+ P F+ F S V C +
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCII 171
>AF153819-1|AAF73242.1| 427|Homo sapiens inwardly-rectifying
potassium channel Kir2.1 protein.
Length = 427
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 152 AYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFISTVSCFV 271
A+LF I I +G+ C+ P F+ F S V C +
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCII 171
>AF021139-1|AAB88797.1| 427|Homo sapiens inward rectifier potassium
channel protein.
Length = 427
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 152 AYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFISTVSCFV 271
A+LF I I +G+ C+ P F+ F S V C +
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCII 171
>AF011904-1|AAC39555.1| 427|Homo sapiens inwardly rectifying
potassium channel Kir 2.1 protein.
Length = 427
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 152 AYLFYIFLTAVIQFGYCCLVGTFPFNPFLSGFISTVSCFV 271
A+LF I I +G+ C+ P F+ F S V C +
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCII 171
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,898,876
Number of Sequences: 237096
Number of extensions: 739520
Number of successful extensions: 1389
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1381
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -