Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_B22
(582 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z95619-1|CAB09112.1| 156|Caenorhabditis elegans Hypothetical pr... 148 2e-36
AF101319-5|AAC69356.2| 530|Caenorhabditis elegans Hypothetical ... 29 3.2
AL032639-9|CAA21633.1| 303|Caenorhabditis elegans Hypothetical ... 28 4.2
Z69718-2|CAA93536.1| 139|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z82259-5|CAB05125.2| 353|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z49125-7|CAN99660.1| 717|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z49125-6|CAA88937.2| 776|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF038608-4|AAU05594.2| 310|Caenorhabditis elegans Serpentine re... 27 9.7
>Z95619-1|CAB09112.1| 156|Caenorhabditis elegans Hypothetical
protein H21P03.1 protein.
Length = 156
Score = 148 bits (359), Expect = 2e-36
Identities = 64/133 (48%), Positives = 98/133 (73%)
Frame = +1
Query: 79 SDWDTVTILRKKPPKASALKTEQAVNAARRQGIPVDTQQKYGAGTNKQHVTTKNTAKLDR 258
+D ++VT++ K+ P LK+ +NAA+R G+ + T++K +G N+QH KNT +LD
Sbjct: 11 TDPNSVTMITKRGPVNKTLKSAAQLNAAQRAGVDISTEKKTMSGGNRQHSANKNTLRLDE 70
Query: 259 ETEELRHEKIPLDLGKLIMQGRQAKGMSQKDLATKICEKPQIVNDYEAGRGIPNNIVLGK 438
ETEEL H+K+ L LGK++ Q R KG +QKDL+T+I EKPQ+V +YE+G+ +PN ++ K
Sbjct: 71 ETEELHHQKVALSLGKVMQQARATKGWTQKDLSTQINEKPQVVGEYESGKAVPNQQIMAK 130
Query: 439 IERAIGIKLRGKE 477
+ERA+G+KLRGK+
Sbjct: 131 MERALGVKLRGKD 143
>AF101319-5|AAC69356.2| 530|Caenorhabditis elegans Hypothetical
protein K08D9.6 protein.
Length = 530
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/56 (28%), Positives = 21/56 (37%)
Frame = -2
Query: 209 PAPYFCCVSTGIPCRRAAFTACSVFKAEAFGGFLRRIVTVSQSDMFNVDHWYDKTK 42
P P C+S + V A FGG L +T FN+ Y+K K
Sbjct: 185 PKPVIICISPQFVAEQWQIFMMQVHVAHRFGGHLHIYLTSIVESFFNLMREYEKRK 240
>AL032639-9|CAA21633.1| 303|Caenorhabditis elegans Hypothetical
protein Y38F1A.8 protein.
Length = 303
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -2
Query: 221 CLLVPAPYFCCVSTGIPCRRAAFTA-CSVFKAEAFGGFLRRIVTVSQSDMFNVDHWYDKT 45
C++ YFC +ST P FTA CS + F L ++ V + +F +++
Sbjct: 213 CVIFLVGYFCAIST--PITYPYFTAHCSPYAYNLFS--LAELIEVGCNSLFYSIAYFEFP 268
Query: 44 KSRVLL 27
K+R+ +
Sbjct: 269 KTRITI 274
>Z69718-2|CAA93536.1| 139|Caenorhabditis elegans Hypothetical
protein W06D11.3 protein.
Length = 139
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 211 TNKQHVTTKNTAKLDRETEELRHEKIPLDLG 303
++KQH+ T+N +D E E+ EKI + G
Sbjct: 71 SSKQHMVTENIETVDAENEQQDGEKIASNTG 101
>Z82259-5|CAB05125.2| 353|Caenorhabditis elegans Hypothetical
protein C28D4.5 protein.
Length = 353
Score = 27.1 bits (57), Expect = 9.7
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 465 KFYSNCPFNFSKNNV-IWNATTSFIIIYNLW 376
K Y N FNF +N++ IW SF Y+LW
Sbjct: 59 KVYGNQRFNFKRNDIDIWR--KSFKDSYSLW 87
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 166 RQGIPVDTQQKYGAGTNKQHVT-TKN 240
+Q IP +QQ+Y +G + H T TKN
Sbjct: 2983 QQQIPAQSQQQYNSGRPQMHTTPTKN 3008
>Z49125-7|CAN99660.1| 717|Caenorhabditis elegans Hypothetical
protein C47G2.5b protein.
Length = 717
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -2
Query: 188 VSTGIPCR---RAAFTACSVFKAEAFGGFLRRIVTVSQSDMFNVDHWYDKTKSRVLLXGF 18
++T +P + R +F A + F ++IVT ++ VD DKT L+ GF
Sbjct: 65 INTDLPMKQQYRLSFIASEILTIRGTDVFQKQIVTTEETRKCLVDFLNDKTPLNHLVAGF 124
>Z49125-6|CAA88937.2| 776|Caenorhabditis elegans Hypothetical
protein C47G2.5a protein.
Length = 776
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -2
Query: 188 VSTGIPCR---RAAFTACSVFKAEAFGGFLRRIVTVSQSDMFNVDHWYDKTKSRVLLXGF 18
++T +P + R +F A + F ++IVT ++ VD DKT L+ GF
Sbjct: 65 INTDLPMKQQYRLSFIASEILTIRGTDVFQKQIVTTEETRKCLVDFLNDKTPLNHLVAGF 124
>AF038608-4|AAU05594.2| 310|Caenorhabditis elegans Serpentine
receptor, class z protein37 protein.
Length = 310
Score = 27.1 bits (57), Expect = 9.7
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -1
Query: 522 IPLFLSARRLQWLASFFSTKFYSNCPFNFSKNNVIWNATTSFIIIYNLWFFTNFSGEVFL 343
IP+F+S R+L L S +F+S P + + W + ++++ + F F ++
Sbjct: 197 IPIFISVRKLSQLT---SAQFHS--PHIY----IFWQSIV--VVVFKIHFIKEFISYLYF 245
Query: 342 TH----SFSLSALHY 310
+ SF +S LHY
Sbjct: 246 DYVYCFSFIISTLHY 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,666,396
Number of Sequences: 27780
Number of extensions: 252105
Number of successful extensions: 720
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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