Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_B19
         (544 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros...    31   1.3  
BT003746-1|AAO41407.1|  556|Drosophila melanogaster RH70415p pro...    29   3.1  
BT003617-1|AAO39620.1|  556|Drosophila melanogaster GH12103p pro...    29   3.1  
AF495381-1|AAM18512.1|  556|Drosophila melanogaster skiff protein.     29   3.1  
AE013599-1225|AAF58707.2|  556|Drosophila melanogaster CG30021-P...    29   3.1  

>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
           Drosophila melanogastertransposable element 297. ).
          Length = 1059

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +2

Query: 422 TESPTREFEFEVPIINEDCNNEELNLSIGNLVXTVYYDV 538
           TE P   F+ ++  I  D N  E +   GN + T+ YDV
Sbjct: 649 TEKPINYFKKQIIFIKSDKNKVEHSKIFGNSITTIQYDV 687


>BT003746-1|AAO41407.1|  556|Drosophila melanogaster RH70415p
           protein.
          Length = 556

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 9   LALHCKLHIACKTNRSLLFENQLQCLLFASEA 104
           L+ HC L+  CK    LL ++ LQ LLFA +A
Sbjct: 84  LSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDA 115


>BT003617-1|AAO39620.1|  556|Drosophila melanogaster GH12103p
           protein.
          Length = 556

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 9   LALHCKLHIACKTNRSLLFENQLQCLLFASEA 104
           L+ HC L+  CK    LL ++ LQ LLFA +A
Sbjct: 84  LSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDA 115


>AF495381-1|AAM18512.1|  556|Drosophila melanogaster skiff protein.
          Length = 556

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 9   LALHCKLHIACKTNRSLLFENQLQCLLFASEA 104
           L+ HC L+  CK    LL ++ LQ LLFA +A
Sbjct: 84  LSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDA 115


>AE013599-1225|AAF58707.2|  556|Drosophila melanogaster CG30021-PA
           protein.
          Length = 556

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = +3

Query: 9   LALHCKLHIACKTNRSLLFENQLQCLLFASEA 104
           L+ HC L+  CK    LL ++ LQ LLFA +A
Sbjct: 84  LSQHCHLNDDCKEAFHLLQDSHLQHLLFAHDA 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,910,085
Number of Sequences: 53049
Number of extensions: 324641
Number of successful extensions: 807
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)