Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_B12
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical pr... 86 2e-17
AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding... 86 2e-17
AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding... 79 4e-15
AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding... 79 4e-15
AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding... 78 5e-15
Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding p... 37 0.014
U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding p... 37 0.014
U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding p... 34 0.10
U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding p... 32 0.41
U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine rece... 31 0.94
U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding p... 31 0.94
U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical pr... 31 0.94
U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical pr... 31 0.94
U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical pr... 31 0.94
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 30 1.6
AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical... 29 2.9
AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical ... 29 2.9
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 28 5.0
U41993-3|AAA83445.1| 384|Caenorhabditis elegans Nuclear hormone... 27 8.8
U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical... 27 8.8
>Z81127-2|CAB03387.1| 137|Caenorhabditis elegans Hypothetical
protein T22G5.2 protein.
Length = 137
Score = 85.8 bits (203), Expect = 2e-17
Identities = 50/118 (42%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Frame = +3
Query: 123 NFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 302
NFDE+MK IGVGLITRKAA + P +E+R DG+ +N STFK T++ FK GEEF E+
Sbjct: 18 NFDEYMKEIGVGLITRKAAAHLKPILEIRLDGETWNFDQFSTFKNTKLSFKLGEEFVENS 77
Query: 303 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPEEMKAVMT--AKDVTCTRVYK 470
D S+ TFE L Q + V E K + T + DV C R ++
Sbjct: 78 PDDRTYNSLFTFENGKLTHRQNKIKENHKSSVLTTWLENGKLIQTYQSGDVICRREWE 135
>AF003141-3|AAK21484.1| 135|Caenorhabditis elegans Lipid binding
protein protein 6 protein.
Length = 135
Score = 85.8 bits (203), Expect = 2e-17
Identities = 41/82 (50%), Positives = 54/82 (65%)
Frame = +3
Query: 123 NFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 302
NF+E+MK +GVGLITRKAA + PT+E++ +GD + STFK T + FK G+EF+E
Sbjct: 16 NFEEYMKEVGVGLITRKAAANLKPTLEIKVEGDLWYSNQYSTFKNTTLSFKLGQEFDETT 75
Query: 303 ADGAKVKSVCTFEGNTLKQVQK 368
DG VKSV FE +QK
Sbjct: 76 PDGRTVKSVVNFENGKFIHIQK 97
>AC024771-9|ABA61863.1| 137|Caenorhabditis elegans Lipid binding
protein protein 9,isoform b protein.
Length = 137
Score = 78.6 bits (185), Expect = 4e-15
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +3
Query: 123 NFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 302
NFDE++K +GVG R A P +E +GDE+ + ++STFK +K+K G +E
Sbjct: 18 NFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEKT 77
Query: 303 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCTRVYK 470
ADG V SV + E + L Q++ G + + + + ++ V T V CTRVY+
Sbjct: 78 ADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCTRVYE 134
>AC024771-8|AAK70656.1| 152|Caenorhabditis elegans Lipid binding
protein protein 9,isoform a protein.
Length = 152
Score = 78.6 bits (185), Expect = 4e-15
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +3
Query: 123 NFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 302
NFDE++K +GVG R A P +E +GDE+ + ++STFK +K+K G +E
Sbjct: 33 NFDEYLKEVGVGWAIRTIATKTKPALEFAVNGDEWTMNSNSTFKNYTLKWKLGTASDEKT 92
Query: 303 ADGAKVKSVCTFEGNTLKQVQKAPDGLEVTYVREFGPE-EMKAVMTAKDVTCTRVYK 470
ADG V SV + E + L Q++ G + + + + ++ V T V CTRVY+
Sbjct: 93 ADGRDVSSVFSIENDHLVQIETGKGGGKDSRIERYIENGKLVIVCTCNGVKCTRVYE 149
>AF003141-5|AAK21486.1| 136|Caenorhabditis elegans Lipid binding
protein protein 5 protein.
Length = 136
Score = 78.2 bits (184), Expect = 5e-15
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 2/117 (1%)
Frame = +3
Query: 123 NFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 302
NF++++K +GVGL+ RKAA A PT+E++ +G+++++ STFK T ++F G EF+E
Sbjct: 17 NFEDYLKEVGVGLLLRKAACAAKPTLEIKVNGNKWHVNQLSTFKNTTLEFTLGVEFDETT 76
Query: 303 ADGAKVKSVCTFEGNTLKQVQK--APDGLEVTYVREFGPEEMKAVMTAKDVTCTRVY 467
DG + KS T E + VQK + R F E++ + + V R Y
Sbjct: 77 PDGRQFKSTITIEDGKVVHVQKRIKDSDHDSVITRWFEGEKLITTLQSGSVISRRAY 133
>Z81127-7|CAB03391.2| 137|Caenorhabditis elegans Hypothetical
protein T22G5.6 protein.
Length = 137
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/73 (43%), Positives = 48/73 (65%)
Frame = +3
Query: 123 NFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDR 302
NF+E++K IGVGL+ RKAA+ +PT+E++ DGD ++ STFK ++ FK E+F E
Sbjct: 18 NFEEYLKEIGVGLLIRKAASLTSPTLEIKLDGDTWHFNQYSTFKNNKLAFKIREKFVEIA 77
Query: 303 ADGAKVKSVCTFE 341
D ++ TFE
Sbjct: 78 PDERSYNTLVTFE 90
>U40420-6|ABD63223.1| 150|Caenorhabditis elegans Lipid binding
protein protein 3,isoform b protein.
Length = 150
Score = 36.7 bits (81), Expect = 0.014
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Frame = +3
Query: 123 NFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSSTFKTTEMK-FKPGEEFE 293
NFDEF+ GV R+ + L K+ +YN+ ++ K T ++ G+ FE
Sbjct: 23 NFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTSKKNTLYHGWELGKTFE 82
Query: 294 EDRADGAKVKSVCTFEGNTLKQVQ---KAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRV 464
+ DG K +F+ L + P+ TY +++ M +TC R
Sbjct: 83 AEGLDGVAHKITFSFKDGVLSEHHIRLNDPEHSAETYYYTIENDQLVMKMVNNGITCRRW 142
Query: 465 YK 470
+K
Sbjct: 143 FK 144
>U40420-5|AAA81433.2| 165|Caenorhabditis elegans Lipid binding
protein protein 3,isoform a protein.
Length = 165
Score = 36.7 bits (81), Expect = 0.014
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Frame = +3
Query: 123 NFDEFMKTIGVGLITRKAANAVTPTVELRKD--GDEYNLVTSSTFKTTEMK-FKPGEEFE 293
NFDEF+ GV R+ + L K+ +YN+ ++ K T ++ G+ FE
Sbjct: 38 NFDEFLAAKGVSWFVRQMIKLAKVSKVLAKNETPGKYNMENLTSKKNTLYHGWELGKTFE 97
Query: 294 EDRADGAKVKSVCTFEGNTLKQVQ---KAPDGLEVTYVREFGPEEMKAVMTAKDVTCTRV 464
+ DG K +F+ L + P+ TY +++ M +TC R
Sbjct: 98 AEGLDGVAHKITFSFKDGVLSEHHIRLNDPEHSAETYYYTIENDQLVMKMVNNGITCRRW 157
Query: 465 YK 470
+K
Sbjct: 158 FK 159
>U64855-7|AAB04984.1| 145|Caenorhabditis elegans Lipid binding
protein protein 4 protein.
Length = 145
Score = 33.9 bits (74), Expect = 0.10
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Frame = +3
Query: 123 NFDEFMKTIGVGLITRKAAN--AVTPTVELRKDGDEYNLVTSSTFKTTEMK-FKPGEEFE 293
NFDEF+ + GV R+ +T + ++ +YN+ ++ K T + ++ G++FE
Sbjct: 18 NFDEFLSSKGVNWFVRQMIKLAGLTKIISQNQEAGKYNMENLTSKKNTNYQAWELGKKFE 77
Query: 294 EDRADGAKVKSVCTFEGNTLKQVQ---KAPDGLEVTYVREFGPEEMKAV-MTAKDVTCTR 461
DG + + F+ L + P+ TY + + M + C R
Sbjct: 78 APGLDGNQHEITFDFKDEILSEHHIRLNEPETSAETYFYTIDDQNQLVMRMENNGIVCRR 137
Query: 462 VYK 470
+K
Sbjct: 138 WFK 140
>U40420-7|AAA81434.1| 159|Caenorhabditis elegans Lipid binding
protein protein 1 protein.
Length = 159
Score = 31.9 bits (69), Expect = 0.41
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 6/122 (4%)
Frame = +3
Query: 123 NFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP---GEEFE 293
NFDE++ G G TRK T K ++ S+ ++ +K G+ F+
Sbjct: 35 NFDEYLTAKGYGWFTRKLVTFATFKKVFTKTSNKNLFDYSNLTSKKDVHYKNVQLGKAFQ 94
Query: 294 EDRADGAKVKSVCTFEGNTLKQVQK---APDGLEVTYVREFGPEEMKAVMTAKDVTCTRV 464
+ D K + T + L + K D E TY F E + M+ V R
Sbjct: 95 GEGLDSTKHEITFTLKDGHLFEHHKPLEGGDAKEETYEYLFDKEFLLVRMSFNGVEGRRF 154
Query: 465 YK 470
YK
Sbjct: 155 YK 156
>U50311-5|AAX22295.1| 299|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform c protein.
Length = 299
Score = 30.7 bits (66), Expect = 0.94
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 513 ADSRTSRGTIMFI*HLFYTLALSSFIVKLILVFTSVIVYRSNC 641
ADS + G I+F HLF+ + S F+ L+ + T + V +C
Sbjct: 51 ADSLHNYGQIIFTAHLFFDIQTSHFVCTLLNIPTLIGVISGSC 93
>U40420-8|AAA81435.1| 161|Caenorhabditis elegans Lipid binding
protein protein 2 protein.
Length = 161
Score = 30.7 bits (66), Expect = 0.94
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 7/123 (5%)
Frame = +3
Query: 123 NFDEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKF----KPGEEF 290
NFDE++ G G TRK T K+ ++ NL S + + F + G +F
Sbjct: 37 NFDEYLTAKGYGWFTRKLVTFATFKKVFAKNANK-NLFDYSNLTSKKDVFYKNVQIGSKF 95
Query: 291 EEDRADGAKVKSVCTF-EGNTLKQVQKAPDG--LEVTYVREFGPEEMKAVMTAKDVTCTR 461
E + D K + T +G+ + + +G E TY F + + M+ ++ R
Sbjct: 96 EGEGLDNTKHEVTFTLKDGHLFEHHKPLEEGESKEETYEYYFDGDFLIQKMSFNNIEGRR 155
Query: 462 VYK 470
YK
Sbjct: 156 FYK 158
>U28991-8|AAM22060.1| 517|Caenorhabditis elegans Hypothetical
protein F08F8.9c protein.
Length = 517
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 129 DEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 278
++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 7 NKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-7|AAK68312.1| 626|Caenorhabditis elegans Hypothetical
protein F08F8.9a protein.
Length = 626
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 129 DEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 278
++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 7 NKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U28991-6|AAK68313.1| 624|Caenorhabditis elegans Hypothetical
protein F08F8.9b protein.
Length = 624
Score = 30.7 bits (66), Expect = 0.94
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 129 DEFMKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKP 278
++ + IGV L RK +A P DG+ V +ST K E K KP
Sbjct: 7 NKIIPVIGVPLEARKLPSARIPKKPKETDGNSTETVVNSTEKPEERKEKP 56
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore complex
protein protein7 protein.
Length = 1217
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 268 FISVVLKVEEVTKLYSSPSLRSSTVGVTALAALRVIRPTPMVFMNSSK-FYGGSHL 104
F S++ K VT S +L SST + +A+ I PT +F NSS +GGS +
Sbjct: 845 FGSILDKETHVTTTPVSVALPSSTDSTQSKSAIPTIAPTMSLFGNSSTGSFGGSSM 900
>AC024859-13|AAK29965.2| 338|Caenorhabditis elegans Hypothetical
protein Y71H2AM.17 protein.
Length = 338
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 168 RKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEE 296
+ A + TP D+ + T++T TTE K KP E+ EE
Sbjct: 296 KPAESTETPAAGTEPSTDDGAIETTTTTTTTENKEKPEEKMEE 338
>AC006807-4|AAK84618.1| 904|Caenorhabditis elegans Hypothetical
protein Y58A7A.4 protein.
Length = 904
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 34 RIKNLSLKSIKLIYKNGIRRQEIQDDFLRRTLMSS*RPSAWV 159
+++N LK+ +L+ KNGI + EI ++ L L +AW+
Sbjct: 800 KLRNRFLKAEQLLIKNGILKTEILENLLGTALYLVENVTAWM 841
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -1
Query: 164 DQTHADGLHELIKVLRRKSSCISCLRIP 81
D+ D L ELIK+ R+KS CL +P
Sbjct: 242 DKGQDDKLEELIKIERQKSRSNQCLSLP 269
>U41993-3|AAA83445.1| 384|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 39 protein.
Length = 384
Score = 27.5 bits (58), Expect = 8.8
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +3
Query: 159 LITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAKVKSVCTF 338
+IT+ ++ V+ +EL+ +EY L+ F + K ++ +E A K+ F
Sbjct: 230 IITQISSLVVSKFIELKVTNEEYVLLVMLFFCNPAISHKLSDKAKESLAKYQKMYCSALF 289
Query: 339 EGNTLKQVQKAPDGLE 386
+K + AP LE
Sbjct: 290 NYCQIKYKKAAPARLE 305
>U40952-2|AAA81737.1| 818|Caenorhabditis elegans Hypothetical
protein C03B1.7 protein.
Length = 818
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +3
Query: 138 MKTIGVGLITRKAANAVTPTVELRKDGDEYNLVTSSTFKTTEMKFKPGEEFEEDRADGAK 317
+K + G I +K + P + + +DG Y K ++FK E FE+ +
Sbjct: 241 IKVLPAGKIEKKLIKELNPEMMVGRDGRRYRQKLREAEKQATVEFKL-ENFEQTNGEAQS 299
Query: 318 VKS 326
V++
Sbjct: 300 VEN 302
>AF039048-13|AAB94231.1| 440|Caenorhabditis elegans Hypothetical
protein F16B4.11 protein.
Length = 440
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 147 IGVGLITRKAANAVTPTVELRKDGDEYNL 233
+ + L+ KA N + V +RKDGD NL
Sbjct: 166 VDISLLVDKATNYILNPVLIRKDGDMSNL 194
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,638,316
Number of Sequences: 27780
Number of extensions: 272801
Number of successful extensions: 657
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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