Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_B06
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 327 4e-90
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 327 4e-90
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 256 1e-68
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 196 6e-68
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 189 1e-48
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 189 1e-48
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 179 2e-45
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 89 3e-18
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 88 4e-18
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 88 4e-18
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 85 5e-17
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 85 5e-17
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 85 5e-17
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 9e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.008
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.13
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.13
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.13
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.23
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.23
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.31
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.2
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.2
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.2
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.2
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.2
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.2
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.2
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 3.8
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 6.7
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 327 bits (804), Expect = 4e-90
Identities = 154/171 (90%), Positives = 160/171 (93%)
Frame = +2
Query: 140 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 319
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 320 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 499
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGV
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV 145
Query: 500 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 652
KQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 146 KQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 196
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTG 138
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 327 bits (804), Expect = 4e-90
Identities = 154/171 (90%), Positives = 160/171 (93%)
Frame = +2
Query: 140 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 319
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 320 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 499
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGV
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV 145
Query: 500 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 652
KQLIV NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 146 KQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 196
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTG 138
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 256 bits (627), Expect = 1e-68
Identities = 124/147 (84%), Positives = 131/147 (89%)
Frame = +2
Query: 140 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 319
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 320 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 499
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGV
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV 145
Query: 500 KQLIVGVNKMDSTEPPYSEPRFEEIKK 580
KQL V+ T P S R + I++
Sbjct: 146 KQL---VSLRSPTRSPDSSRRSDTIQR 169
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTG 138
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 196 bits (478), Expect(2) = 6e-68
Identities = 89/92 (96%), Positives = 92/92 (100%)
Frame = +2
Query: 140 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 319
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 320 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 415
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 79.4 bits (187), Expect(2) = 6e-68
Identities = 36/49 (73%), Positives = 40/49 (81%)
Frame = +2
Query: 506 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGW 652
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 162
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTG 138
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 189 bits (461), Expect = 1e-48
Identities = 92/172 (53%), Positives = 124/172 (72%), Gaps = 1/172 (0%)
Frame = +2
Query: 140 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 319
HL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FETS
Sbjct: 189 HLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHR 248
Query: 320 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 499
+ ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV
Sbjct: 249 RIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGV 308
Query: 500 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGW 652
QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+
Sbjct: 309 TQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGF 356
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 73 EKTHINIVVIGHVDSGKSTTTG 138
+K IN++V+GHVD+GKST G
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMG 188
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 189 bits (461), Expect = 1e-48
Identities = 92/172 (53%), Positives = 124/172 (72%), Gaps = 1/172 (0%)
Frame = +2
Query: 140 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKY 319
HL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERERG+T+DI FETS
Sbjct: 207 HLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHR 266
Query: 320 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 499
+ ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV
Sbjct: 267 RIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGV 326
Query: 500 KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI-KKIGYNPAAVAFVPISGW 652
QLIV VNK+D+ + +S+ RF+EIK +S ++ ++ G++ FVP+SG+
Sbjct: 327 TQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGF 374
Score = 33.9 bits (74), Expect = 0.10
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +1
Query: 73 EKTHINIVVIGHVDSGKSTTTG 138
+K IN++V+GHVD+GKST G
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMG 206
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 179 bits (435), Expect = 2e-45
Identities = 79/170 (46%), Positives = 120/170 (70%), Gaps = 1/170 (0%)
Frame = +2
Query: 143 LIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYY 322
L++ G +DKRT+EK+E+EA+E G+ S+ +W +D ERE+G T+++ FET K +
Sbjct: 129 LMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRH 188
Query: 323 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 502
TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE G + GQTREH++L T GVK
Sbjct: 189 FTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVK 248
Query: 503 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISG 649
L++ VNKMD + E RF+EI+ +++ +++K+G+NP + +VP SG
Sbjct: 249 HLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSG 298
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1
Query: 67 GKEKTHINIVVIGHVDSGKSTTTG 138
G K HIN+V +GHVD+GKST G
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGG 127
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 89.0 bits (211), Expect = 3e-18
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = +2
Query: 140 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 265
HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
Score = 54.0 bits (124), Expect = 9e-08
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTG 138
MGKEK HINIVVIGHVDSGKSTTTG
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTG 25
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 88.2 bits (209), Expect = 4e-18
Identities = 52/132 (39%), Positives = 74/132 (56%)
Frame = +2
Query: 242 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 421
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 422 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 601
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 602 KIGYNPAAVAFV 637
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 76 KTHINIVVIGHVDSGKSTTTGS 141
K ++N+ IGH+D GK+T T +
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSA 64
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 88.2 bits (209), Expect = 4e-18
Identities = 52/132 (39%), Positives = 74/132 (56%)
Frame = +2
Query: 242 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 421
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 422 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 601
G E QT+EH +LA +GVK + + +NK D E E + ++ E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 602 KIGYNPAAVAFV 637
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 76 KTHINIVVIGHVDSGKSTTTGS 141
K ++N+ IGH+D GK+T T +
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSA 64
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 84.6 bits (200), Expect = 5e-17
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +2
Query: 242 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 421
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 422 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 595
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 147 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 196
Query: 596 IKKIGY 613
+ + GY
Sbjct: 197 LNEFGY 202
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGS 141
++K H+N+ IGHVD GK+T T +
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSA 68
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 84.6 bits (200), Expect = 5e-17
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +2
Query: 242 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 421
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 422 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 595
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 596 IKKIGY 613
+ + GY
Sbjct: 198 LNEFGY 203
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGS 141
++K H+N+ IGHVD GK+T T +
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSA 69
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 84.6 bits (200), Expect = 5e-17
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +2
Query: 242 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 421
+D E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 422 TGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 595
G QTREH LLA +GV ++V +NK+D E P +E R E ++ ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 596 IKKIGY 613
+ + GY
Sbjct: 198 LNEFGY 203
Score = 33.5 bits (73), Expect = 0.13
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 70 KEKTHINIVVIGHVDSGKSTTTGS 141
++K H+N+ IGHVD GK+T T +
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSA 69
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 53.2 bits (122), Expect = 2e-07
Identities = 35/98 (35%), Positives = 49/98 (50%)
Frame = +2
Query: 239 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 418
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 419 GTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 532
G QT + LAF + Q+I +NK+D
Sbjct: 136 NQG-------VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 44.0 bits (99), Expect = 9e-05
Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Frame = +2
Query: 212 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 388
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 389 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 532
AD VL+VAA G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/96 (30%), Positives = 49/96 (51%)
Frame = +2
Query: 323 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 502
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 503 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 610
++I+ +NK D E + + E K+V +K +G
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMG 158
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 85 INIVVIGHVDSGKSTTT 135
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/97 (32%), Positives = 43/97 (44%)
Frame = +2
Query: 242 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 421
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 422 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 532
G G+ T L + + I VNKMD
Sbjct: 146 VG----GVQSQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +2
Query: 239 VLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 418
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 419 GTG 427
G
Sbjct: 124 SAG 126
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 37.5 bits (83), Expect = 0.008
Identities = 22/85 (25%), Positives = 38/85 (44%)
Frame = +2
Query: 320 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 499
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 500 KQLIVGVNKMDSTEPPYSEPRFEEI 574
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 242 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 412
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 242 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 412
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -3
Query: 525 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 397
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 245 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 409
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 410 VAAGTG 427
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +2
Query: 245 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 409
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 410 VAAGTG 427
V A G
Sbjct: 107 VDAHEG 112
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 32.3 bits (70), Expect = 0.31
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +2
Query: 329 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 508
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 509 IVGVNKMDSTEPPYSEPR 562
++ +NK+D S PR
Sbjct: 605 VIALNKIDRLYEYESNPR 622
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 278 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 427
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGS 141
M +++ N+ VI HVD GKST T S
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDS 38
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = +2
Query: 278 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 427
T+++ K + + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 64 MGKEKTHINIVVIGHVDSGKSTTTGS 141
M +++ N+ VI HVD GKST T S
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDS 38
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 167 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 167 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 588 PHTSRRLATTQLLSLSCPFLD 650
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 588 PHTSRRLATTQLLSLSCPFLD 650
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 588 PHTSRRLATTQLLSLSCPFLD 650
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3
Query: 588 PHTSRRLATTQLLSLSCPFLD 650
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 85 INIVVIGHVDSGKSTTT 135
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical
protein F14D2.15 protein.
Length = 299
Score = 28.7 bits (61), Expect = 3.8
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Frame = -2
Query: 508 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 350
E + +E E G+ L V RD F + +GTGS + H ++R DH + +
Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83
Query: 349 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 230
S S +D E+P ++ C++ +L + +Y SI
Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 323 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 418
V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,065,507
Number of Sequences: 27780
Number of extensions: 310878
Number of successful extensions: 928
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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