Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_B05
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 116 2e-26
11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 114 7e-26
03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 113 2e-25
10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 31 0.79
02_05_1161 - 34583072-34583249,34583363-34583715,34583820-345840... 30 1.4
02_05_1183 + 34788219-34788533,34788733-34788930,34789010-347893... 29 2.4
02_03_0106 + 15292869-15296138 29 2.4
07_01_0091 - 692416-693906 29 3.2
02_02_0319 - 8917042-8917122,8917628-8917680,8917754-8917800,891... 29 3.2
02_05_1179 + 34761054-34761198,34761293-34761447,34761541-347617... 29 4.2
08_02_1331 + 26195949-26196132,26196606-26196710,26197270-261981... 28 5.6
03_04_0147 + 17690840-17691687,17692328-17692532,17693048-176931... 28 5.6
06_01_0788 - 5895600-5896378,5896519-5896846 28 7.4
12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 27 9.7
>05_01_0490 +
4083768-4083775,4083845-4084336,4084441-4084522,
4086671-4087357,4087555-4087813,4088435-4088558,
4089474-4089564
Length = 580
Score = 116 bits (278), Expect = 2e-26
Identities = 74/179 (41%), Positives = 98/179 (54%), Gaps = 12/179 (6%)
Frame = +2
Query: 125 PRSXIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIR 304
P+ I+D+G K+ VD+F CVHLVS E E ++SEALEA RI CNKY+ K+ GKD FH+R
Sbjct: 25 PKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLR 84
Query: 305 MRLHPFHVYPHQ*NVIMRWS**APDWDAWCVWQASGXL*HVFALDSPSCPCALVTGGRHR 484
+R+HPFHV + N ++ C A P CA V G+
Sbjct: 85 VRVHPFHVL--RINKMLS-----------CAGADRLQTGMRGAFGKPQGTCARVDIGQVL 131
Query: 485 SSRLC----AVPSSSSPER--------QKIYVSKKWGFTKYERDEFEKLREEGRLANDG 625
S C AV +S + R QKI S+KWGFTK+ RDE+ +L+ EGR+ DG
Sbjct: 132 LSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDG 190
Score = 89.8 bits (213), Expect = 2e-18
Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 2/123 (1%)
Frame = +3
Query: 60 CYRYCKNKPYPKSRFCRGCT*SQDPVSSIWVRRERPLTTFHCA--CTWCPTNMNS*AQRL 233
CYR KNKPYPKSR+CRG + + + ++++ HC +W N+ S A
Sbjct: 4 CYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEA 63
Query: 234 WRQDVSAAISTS*RTAERISSISA*DFTLSTFIRINKMLSCAGADRLQTGMRGAFGKPQG 413
R + ++ S + F + +RINKMLSCAGADRLQTGMRGAFGKPQG
Sbjct: 64 ARIACNKYMTKSAGKDAFHLRVRVHPFHV---LRINKMLSCAGADRLQTGMRGAFGKPQG 120
Query: 414 YCS 422
C+
Sbjct: 121 TCA 123
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/51 (50%), Positives = 31/51 (60%)
Frame = +1
Query: 415 TVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGTSKDLRIKEVGFHK 567
T ARV IGQ ++SVR EALRRAKFKFPG K + ++ GF K
Sbjct: 121 TCARVDIGQVLLSVRCKPNNAVHASEALRRAKFKFPGRQKIIESRKWGFTK 171
>11_01_0740 +
6243517-6243526,6244822-6245323,6245415-6245496,
6245741-6245821
Length = 224
Score = 114 bits (274), Expect = 7e-26
Identities = 65/171 (38%), Positives = 89/171 (52%)
Frame = +2
Query: 125 PRSXIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIR 304
P+ I+D+G K+ VD+FP CVHLVS E E +SSEALEA RI CNKY+ KN GKD FH+R
Sbjct: 29 PKIRIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLR 88
Query: 305 MRLHPFHVYPHQ*NVIMRWS**APDWDAWCVWQASGXL*HVFALDSPSCPCALVTGGRHR 484
+R+HPFHV + + + G V + +H
Sbjct: 89 VRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHA 148
Query: 485 SSRLCAVPSSSSPERQKIYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQ 637
L ++ I+ K WGFTK+ R+E+ KL+ EGR+ +DG Q
Sbjct: 149 EEALRRAKFKFPGRQKIIHSRK-WGFTKFTREEYVKLKAEGRIMSDGVNAQ 198
Score = 100 bits (240), Expect = 9e-22
Identities = 57/130 (43%), Positives = 77/130 (59%), Gaps = 2/130 (1%)
Frame = +3
Query: 39 MGRRPARCYRYCKNKPYPKSRFCRGCT*SQDPVSSIWVRRERPLTTFHCA--CTWCPTNM 212
MGRRPARCYR KNKPYPKSR+CRG + + + ++++ +C +W N+
Sbjct: 1 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60
Query: 213 NS*AQRLWRQDVSAAISTS*RTAERISSISA*DFTLSTFIRINKMLSCAGADRLQTGMRG 392
+S A R + ++ + + F + +RINKMLSCAGADRLQTGMRG
Sbjct: 61 SSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHV---LRINKMLSCAGADRLQTGMRG 117
Query: 393 AFGKPQGYCS 422
AFGKPQG C+
Sbjct: 118 AFGKPQGTCA 127
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/51 (50%), Positives = 32/51 (62%)
Frame = +1
Query: 415 TVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGTSKDLRIKEVGFHK 567
T ARV IGQ ++SVR + EALRRAKFKFPG K + ++ GF K
Sbjct: 125 TCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTK 175
>03_02_0897 -
12239375-12239458,12240035-12240116,12240213-12240714,
12241150-12241303,12241458-12241629,12242237-12242443,
12242926-12243323
Length = 532
Score = 113 bits (271), Expect = 2e-25
Identities = 67/170 (39%), Positives = 92/170 (54%), Gaps = 3/170 (1%)
Frame = +2
Query: 125 PRSXIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIR 304
P+ IFD+G+K+ + DDFPLCVHLVS E E +SSEALEA RI CNKY+ K+ GKD FH+R
Sbjct: 336 PKIRIFDVGQKKRSADDFPLCVHLVSWEKENVSSEALEAARIACNKYMAKHAGKDAFHLR 395
Query: 305 MRLHPFHVYPHQ*NVIMRWS**APDWDAWCVWQASGXL*HV---FALDSPSCPCALVTGG 475
+ HP+HV + + + +G V L S C A
Sbjct: 396 VCAHPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCARVRIGQVLLSVRCRDA---NA 452
Query: 476 RHRSSRLCAVPSSSSPERQKIYVSKKWGFTKYERDEFEKLREEGRLANDG 625
H L ++ I+ +K WGFT+++RDE+ KL+ EGR+ DG
Sbjct: 453 AHAQEALRRAKFKFPGRQRVIFSAK-WGFTRFKRDEYLKLKSEGRIVPDG 501
Score = 85.4 bits (202), Expect = 3e-17
Identities = 53/127 (41%), Positives = 71/127 (55%), Gaps = 3/127 (2%)
Frame = +3
Query: 51 PARCYRYCKNKPYPKSRFCRGCT*SQDPVSSIWVRRERPLTTFH-CA--CTWCPTNMNS* 221
P RCYR KNKPYPKSR+CRG + + + +++R F C +W N++S
Sbjct: 312 PVRCYRQIKNKPYPKSRYCRGVPDPKIRIFDVG-QKKRSADDFPLCVHLVSWEKENVSSE 370
Query: 222 AQRLWRQDVSAAISTS*RTAERISSISA*DFTLSTFIRINKMLSCAGADRLQTGMRGAFG 401
A R + ++ + A + + +RINKMLSCAGADRLQTGMRGAFG
Sbjct: 371 ALEAARIACNKYMAKHAGKDAFHLRVCAHPYHV---LRINKMLSCAGADRLQTGMRGAFG 427
Query: 402 KPQGYCS 422
KP G C+
Sbjct: 428 KPTGTCA 434
Score = 51.2 bits (117), Expect = 7e-07
Identities = 27/49 (55%), Positives = 32/49 (65%)
Frame = +1
Query: 415 TVARVRIGQPIMSVRSSDRWKAQVIEALRRAKFKFPGTSKDLRIKEVGF 561
T ARVRIGQ ++SVR D A EALRRAKFKFPG + + + GF
Sbjct: 432 TCARVRIGQVLLSVRCRDANAAHAQEALRRAKFKFPGRQRVIFSAKWGF 480
>10_08_0141 +
15159160-15159306,15159708-15159815,15159958-15160006,
15160067-15160182,15160358-15160399,15161026-15161442,
15162356-15162509,15162911-15162975,15163793-15163870,
15163951-15164061,15164227-15164271,15164677-15164850,
15165383-15166335,15166471-15166681,15167037-15167196,
15168786-15169174
Length = 1072
Score = 31.1 bits (67), Expect = 0.79
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 164 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 283
T D P C +HL SD Y S E ++AG+ C L K G
Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627
>02_05_1161 -
34583072-34583249,34583363-34583715,34583820-34584002,
34584096-34584250,34584346-34584493
Length = 338
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -1
Query: 225 ELSCSYSSDTKCTHSGKSSTVALFLPKSKIXDLGIRYIPDRTSISDTV 82
EL Y + KC GK ++ DLG+ + P R S+++ V
Sbjct: 270 ELFPRYPATAKCEDDGKPMAKPYKFSNQRLKDLGLEFTPLRKSLNEAV 317
>02_05_1183 +
34788219-34788533,34788733-34788930,34789010-34789359,
34789463-34789619
Length = 339
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = -1
Query: 225 ELSCSYSSDTKCTHSGKSSTVALFLPKSKIXDLGIRYIPDRTSISDTV 82
+L Y+ +KC GK ++ DLG+ + P R S+ D V
Sbjct: 278 DLFPQYTIASKCDDKGKPMVKPYEFSNQRLKDLGLEFTPLRKSLYDAV 325
>02_03_0106 + 15292869-15296138
Length = 1089
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = -1
Query: 309 LMRIWN*SFPQFFTRYLLQQIRPASKASELSCSYSSDTKCTHSGKSSTVALFLPKSKIXD 130
L+ W+ +FP++ LL + R EL CS S C GK+ ++ +P+ +I
Sbjct: 1008 LIIFWSIAFPRWLE--LLIRKRDGLCHFELQCSLSLLRSCLDGGKNWSIVQQIPEVRITS 1065
Query: 129 L-GIRYI 112
G RYI
Sbjct: 1066 TDGKRYI 1072
>07_01_0091 - 692416-693906
Length = 496
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/65 (24%), Positives = 29/65 (44%)
Frame = -3
Query: 424 VLQXP*GLPNAPRIPVWSLSAPAHDNILLMRINVERVKSHADMELILSAVLYEVLIAADT 245
VL+ P P APR PV+ P + ++ R HA + ++ +Y + A+
Sbjct: 220 VLRAPPPPPPAPRAPVYHHPLPLGPRVAVLAAPAPRPARHAPVRARVAPPVYRAVARAEP 279
Query: 244 SCLQS 230
+ Q+
Sbjct: 280 AAAQT 284
>02_02_0319 -
8917042-8917122,8917628-8917680,8917754-8917800,
8917901-8917992,8919725-8920060,8920370-8920423,
8920547-8920879,8921133-8921207,8921293-8921441,
8922411-8922429
Length = 412
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = +2
Query: 116 YLIPRSXIFDLGKKRATVDDF-PLCVHLVSDEYEQLSS 226
+++P S ++GK+ ATVD+ P C LV ++Y++ S
Sbjct: 17 HVLPASLRENMGKEGATVDNMDPSCPFLVLEKYDRKKS 54
>02_05_1179 +
34761054-34761198,34761293-34761447,34761541-34761723,
34761825-34762177,34762288-34762451,34762837-34762930,
34763898-34763958
Length = 384
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = -1
Query: 225 ELSCSYSSDTKCTHSGKSSTVALFLPKSKIXDLGIRYIPDRTSISDTV 82
+L Y + KC GK ++ DLG+ + P R S+ + V
Sbjct: 269 DLFPQYPATAKCEDDGKPMAKPYKFSNQRLKDLGLEFTPLRKSLHEAV 316
>08_02_1331 +
26195949-26196132,26196606-26196710,26197270-26198127,
26198669-26199458,26200240-26200329,26200636-26200712,
26200797-26201383
Length = 896
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 489 RGSAPCQVQVPRNVKRSTYQRSGVSQS 569
+GS PC+ +VP+ +K++ Y R G+ S
Sbjct: 727 KGSFPCKAKVPKELKKACY-RQGIWSS 752
>03_04_0147 +
17690840-17691687,17692328-17692532,17693048-17693199,
17693306-17693597,17693807-17693962,17694561-17694764,
17694875-17694987,17695078-17695192,17695293-17695382,
17695463-17695666,17695764-17695859,17696094-17696216,
17696308-17696400,17696477-17696641,17697179-17697268,
17697356-17697520
Length = 1036
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 211 IFVGHQVHAQWKVVNGRSLLTQIEDTGSWDQVHPRQNLDFGYGLFLQY 68
+F GHQ+ + V N L IE TGS Q + N+ L+Y
Sbjct: 665 LFEGHQLCLDYLVKNLLKLYVDIEFTGSHTQFFDKFNIRHNIAELLEY 712
>06_01_0788 - 5895600-5896378,5896519-5896846
Length = 368
Score = 27.9 bits (59), Expect = 7.4
Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +3
Query: 372 LQTGMRGAFGKPQGYCSTCSHWTAHHVRAL**QVEGTGHRGSA-PCQVQVPRNVKRSTYQ 548
L T G QGY T WT HV A V+ +G+ CQ+ V + YQ
Sbjct: 53 LITEATGVSDTAQGYPETPGVWTREHVEAWKPIVDAVHRKGALFICQLWHVGRVSTNDYQ 112
Query: 549 RSG 557
+G
Sbjct: 113 PNG 115
>12_02_0957 +
24807261-24807311,24807436-24807773,24808727-24808927,
24809024-24809069,24809284-24809600,24809949-24810072,
24810465-24810537,24810968-24811173,24811384-24811651,
24811780-24811877,24812116-24812379
Length = 661
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 270 TRYLLQQIRPASKASELSCSYSSDTKCTHSGKSS 169
+R+ ++ P+ ELSC ++T C H G S
Sbjct: 85 SRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,403,085
Number of Sequences: 37544
Number of extensions: 472706
Number of successful extensions: 1362
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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