Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP11_F_A08
(465 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 134 5e-33
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 130 1e-31
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 112 2e-26
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 97 1e-21
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 64 1e-11
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 38 8e-04
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 31 0.087
SPBC336.12c |cdc10||MBF transcription factor complex subunit Cdc... 27 1.4
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 27 1.9
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 25 5.7
SPAC1F7.08 |fio1||iron transport multicopper oxidase Fio1|Schizo... 25 5.7
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 25 5.7
SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting pr... 25 7.5
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 134 bits (325), Expect = 5e-33
Identities = 60/78 (76%), Positives = 69/78 (88%)
Frame = +1
Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGXK 390
YVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+V+S K
Sbjct: 39 YVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGK 98
Query: 391 PKIKVAYKGEDKTFSPRK 444
P ++V YKGE KTF+P +
Sbjct: 99 PVLQVEYKGETKTFTPEE 116
Score = 28.7 bits (61), Expect = 0.46
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 141 VGVFQHGKVEIIANDQGQQ 197
VG F + +VEIIANDQG +
Sbjct: 16 VGHFSNNRVEIIANDQGNR 34
Score = 28.3 bits (60), Expect = 0.61
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2
Query: 104 AVGIDLGTTYSC 139
++GIDLGTTYSC
Sbjct: 4 SIGIDLGTTYSC 15
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 130 bits (314), Expect = 1e-31
Identities = 58/78 (74%), Positives = 67/78 (85%)
Frame = +1
Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGXK 390
YVAFTDTERLIGDAAKNQVAMNP+NTIFDAKRLIGR+F D VQ+DMKHWPF+V+ K
Sbjct: 39 YVAFTDTERLIGDAAKNQVAMNPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGK 98
Query: 391 PKIKVAYKGEDKTFSPRK 444
P I+V +KGE KTF+P +
Sbjct: 99 PLIQVEFKGETKTFTPEE 116
Score = 28.7 bits (61), Expect = 0.46
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 141 VGVFQHGKVEIIANDQGQQ 197
VG F + +VEIIANDQG +
Sbjct: 16 VGHFSNNRVEIIANDQGNR 34
Score = 28.3 bits (60), Expect = 0.61
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +2
Query: 104 AVGIDLGTTYSC 139
++GIDLGTTYSC
Sbjct: 4 SIGIDLGTTYSC 15
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 112 bits (270), Expect = 2e-26
Identities = 48/78 (61%), Positives = 62/78 (79%)
Frame = +1
Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGXK 390
+VAFT+TERL+GDAAKNQ AMNP NT+FDAKRLIGR++ED Q D+KHWPF+V+ +
Sbjct: 43 FVAFTETERLVGDAAKNQAAMNPRNTVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGI 102
Query: 391 PKIKVAYKGEDKTFSPRK 444
P I+V Y GE K F+ ++
Sbjct: 103 PTIEVNYLGEKKQFTAQE 120
Score = 29.5 bits (63), Expect = 0.26
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2
Query: 104 AVGIDLGTTYSC 139
A+GIDLGTTYSC
Sbjct: 8 AIGIDLGTTYSC 19
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 97.1 bits (231), Expect = 1e-21
Identities = 42/78 (53%), Positives = 58/78 (74%)
Frame = +1
Query: 211 YVAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGXK 390
YVAFT+ ERL+G+AAKNQ NP NTIFD KRLIGRKF++ T+ D+K +PF +V+D +
Sbjct: 72 YVAFTEDERLVGEAAKNQAPSNPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNR 131
Query: 391 PKIKVAYKGEDKTFSPRK 444
P ++V G+ K F+P +
Sbjct: 132 PLVEVNVGGKKKKFTPEE 149
Score = 29.5 bits (63), Expect = 0.26
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +3
Query: 141 VGVFQHGKVEIIANDQGQQ 197
V V ++G+VEIIANDQG +
Sbjct: 49 VAVMKNGRVEIIANDQGNR 67
Score = 27.9 bits (59), Expect = 0.81
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 107 VGIDLGTTYSC 139
+GIDLGTTYSC
Sbjct: 38 IGIDLGTTYSC 48
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 64.1 bits (149), Expect = 1e-11
Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = +1
Query: 214 VAFT-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV 375
VAFT D ERL+G +AK Q +NP NT F KRLIGR+F++ VQ D+K P+++V
Sbjct: 88 VAFTKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIV 142
Score = 29.1 bits (62), Expect = 0.35
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2
Query: 95 KAPAVGIDLGTTYSC 139
K P +GIDLGTT SC
Sbjct: 49 KGPVIGIDLGTTTSC 63
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 37.9 bits (84), Expect = 8e-04
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +1
Query: 214 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQ 342
V++ + R +G+AAK+ A N NT+ KRL GR ++D ++
Sbjct: 43 VSYGERSRFLGEAAKSAEASNFRNTVGSLKRLAGRTYDDPEIK 85
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 31.1 bits (67), Expect = 0.087
Identities = 19/73 (26%), Positives = 33/73 (45%)
Frame = +1
Query: 214 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGXKP 393
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 394 KIKVAYKGEDKTF 432
+K+ G + F
Sbjct: 185 -LKLMIDGTVRNF 196
>SPBC336.12c |cdc10||MBF transcription factor complex subunit
Cdc10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 767
Score = 27.1 bits (57), Expect = 1.4
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +3
Query: 96 KHPQ*ESIWVPRTLAVGVF-QHGKVEII 176
KHPQ + +WVP A+ + ++G EI+
Sbjct: 131 KHPQIDGVWVPYDRAISIAKRYGVYEIL 158
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 26.6 bits (56), Expect = 1.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 132 TLAVGVFQHGKVEIIANDQGQQDHSVLCCVHRHRASHR 245
T A G +H KV + DQG +D C + ++SH+
Sbjct: 1256 TKAKGDIEH-KVYQLLKDQGCEDFGTKCVIEEVKSSHK 1292
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 25.0 bits (52), Expect = 5.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 417 TLICYLDLRFASITDNLERPVLHVGLHSSIFELTSDETFGI 295
T I L + S+TDN+ER + +G + I +TS F +
Sbjct: 142 TNIALLLATYPSVTDNIER-FIFMGGSTGIGNITSQAEFNV 181
>SPAC1F7.08 |fio1||iron transport multicopper oxidase
Fio1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 622
Score = 25.0 bits (52), Expect = 5.7
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -3
Query: 208 TEWSCXPWSLAMISTFPCWKTPT 140
T+W P+++ + F WK PT
Sbjct: 164 TDWYYTPFNILVPDEFKTWKNPT 186
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 25.0 bits (52), Expect = 5.7
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 214 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRK-FEDATVQADMKHWP 363
VAF ER+ G A N P ++I + K L+ E VQ +P
Sbjct: 61 VAFKGNERIFGVDASNLATRFPAHSIRNVKELLDTAGLESVLVQKYQSSYP 111
>SPAC1A6.01c ||SPAC23C4.20c|human thyroid receptor interacting
protein homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 455
Score = 24.6 bits (51), Expect = 7.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 387 ASITDNLERPVLHVGLHSS 331
A + NL RP+ H LHSS
Sbjct: 408 APVIRNLPRPIYHQDLHSS 426
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,730,688
Number of Sequences: 5004
Number of extensions: 30796
Number of successful extensions: 96
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 96
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 176367270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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