Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_A02
         (477 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0434 + 17896432-17896551,17896709-17896786,17898528-17898836     29   1.9  
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553...    29   1.9  
02_02_0522 - 11161385-11161537,11162513-11162668,11164176-111642...    27   7.8  

>10_08_0434 + 17896432-17896551,17896709-17896786,17898528-17898836
          Length = 168

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1

Query: 436 MSYMLXHLHNGWQV 477
           MSY+L HLH+GW V
Sbjct: 1   MSYLLPHLHSGWAV 14


>07_01_0725 -
           5532803-5533324,5533631-5533657,5534285-5534398,
           5534564-5534731,5535951-5536193,5537178-5537261,
           5537357-5538117,5539637-5539730,5540633-5540899,
           5541311-5541316,5542538-5542657
          Length = 801

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1

Query: 436 MSYMLXHLHNGWQV 477
           MSY+L HLH+GW V
Sbjct: 1   MSYLLPHLHSGWAV 14


>02_02_0522 -
           11161385-11161537,11162513-11162668,11164176-11164298,
           11164404-11164466,11164512-11164577,11165128-11165232,
           11165336-11165435,11165520-11165590,11166037-11166093,
           11167215-11167292,11167367-11167441,11168490-11168540,
           11169015-11169094,11169560-11169660,11169749-11169810,
           11170084-11170590
          Length = 615

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = +3

Query: 66  ILLNNYKFKILYFTEHSFCYEVTK-KTTPTLNYSKI 170
           + L  +KF  LYF +HS  Y +TK K      Y+K+
Sbjct: 432 VYLATFKFISLYFVKHSRSYVLTKPKNALGRQYTKL 467


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,374,234
Number of Sequences: 37544
Number of extensions: 170117
Number of successful extensions: 244
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 979080328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)