Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_A02
         (477 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC019272-1|AAH19272.1|  142|Homo sapiens thioredoxin-like 4A pro...    34   0.22 
BC001046-1|AAH01046.1|  142|Homo sapiens thioredoxin-like 4A pro...    34   0.22 
AF146373-1|AAF17332.1|  142|Homo sapiens thioredoxin-like U5 snR...    34   0.22 
AF023612-1|AAB81951.1|   91|Homo sapiens Dim1p homolog protein.        34   0.22 
AF023611-1|AAB81950.1|  142|Homo sapiens Dim1p homolog protein.        34   0.22 
AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy c...    31   2.1  

>BC019272-1|AAH19272.1|  142|Homo sapiens thioredoxin-like 4A
           protein.
          Length = 142

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 436 MSYMLXHLHNGWQV 477
           MSYML HLHNGWQV
Sbjct: 1   MSYMLPHLHNGWQV 14


>BC001046-1|AAH01046.1|  142|Homo sapiens thioredoxin-like 4A
           protein.
          Length = 142

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 436 MSYMLXHLHNGWQV 477
           MSYML HLHNGWQV
Sbjct: 1   MSYMLPHLHNGWQV 14


>AF146373-1|AAF17332.1|  142|Homo sapiens thioredoxin-like U5 snRNP
           protein U5-15kD protein.
          Length = 142

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 436 MSYMLXHLHNGWQV 477
           MSYML HLHNGWQV
Sbjct: 1   MSYMLPHLHNGWQV 14


>AF023612-1|AAB81951.1|   91|Homo sapiens Dim1p homolog protein.
          Length = 91

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 436 MSYMLXHLHNGWQV 477
           MSYML HLHNGWQV
Sbjct: 1   MSYMLPHLHNGWQV 14


>AF023611-1|AAB81950.1|  142|Homo sapiens Dim1p homolog protein.
          Length = 142

 Score = 34.3 bits (75), Expect = 0.22
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 436 MSYMLXHLHNGWQV 477
           MSYML HLHNGWQV
Sbjct: 1   MSYMLPHLHNGWQV 14


>AY045575-1|AAK92217.1| 4624|Homo sapiens axonemal dynein heavy chain
            DNAH5 protein.
          Length = 4624

 Score = 31.1 bits (67), Expect = 2.1
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = -2

Query: 236  LVTVHVFYRSVFKKLCLLRLTSDFRVV*SRRCLFCYF--ITKRMFCEIENFKFXXXX*YV 63
            L+T+HV  R +F  LC + + S       ++C F YF   + +M   I +  F     ++
Sbjct: 1889 LITIHVHQRDIFDDLCHMHIKSPMDFEWLKQCRF-YFNEDSDKMMIHITDVAFIYQNEFL 1947

Query: 62   GIT 54
            G T
Sbjct: 1948 GCT 1950


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,557,473
Number of Sequences: 237096
Number of extensions: 1062750
Number of successful extensions: 1283
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)