Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP11_F_A02
         (477 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071048-1|AAL48670.1|  142|Drosophila melanogaster RE13747p pro...    35   0.065
AE014134-734|AAF51017.2|  142|Drosophila melanogaster CG3058-PA ...    35   0.065
AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein...    31   0.81 
AE014134-3362|AAF53979.2|  178|Drosophila melanogaster CG31624-P...    29   4.3  
AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA ...    27   9.9  

>AY071048-1|AAL48670.1|  142|Drosophila melanogaster RE13747p
           protein.
          Length = 142

 Score = 34.7 bits (76), Expect = 0.065
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 436 MSYMLXHLHNGWQV 477
           MSYML HLHNGWQV
Sbjct: 1   MSYMLPHLHNGWQV 14


>AE014134-734|AAF51017.2|  142|Drosophila melanogaster CG3058-PA
           protein.
          Length = 142

 Score = 34.7 bits (76), Expect = 0.065
 Identities = 13/14 (92%), Positives = 13/14 (92%)
 Frame = +1

Query: 436 MSYMLXHLHNGWQV 477
           MSYML HLHNGWQV
Sbjct: 1   MSYMLPHLHNGWQV 14


>AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein
           protein.
          Length = 2797

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
 Frame = -2

Query: 332 RTTEQILILFCSLKFAFHI*DIPKLFYSHILFLVTVHVFYRSVFKKLCLLRLTSDFRVV* 153
           RT  + L+L  +      + D+  L       +VT+HV  R +F  LC LR+ S      
Sbjct: 257 RTNNKFLVLL-NFFIDLTVKDLTSLDRIRFETMVTIHVHQRDIFDDLCTLRIKSAGDFEW 315

Query: 152 SRRCLFCY-FITKRMFCEIENFKFXXXX*YVGIT 54
            ++  F Y      +   I +  F     Y+G+T
Sbjct: 316 QKQARFYYNEDNDDVIVGITDVNFVYQNEYLGVT 349


>AE014134-3362|AAF53979.2|  178|Drosophila melanogaster CG31624-PA
           protein.
          Length = 178

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 248 ENKITLECLRCERQISVSKIISIFVQWSYN 337
           EN     C +CE+ I+ S ++++ V+W  N
Sbjct: 119 ENLFAARCAKCEKPITDSAVLAMNVKWHRN 148


>AE014297-996|AAF54422.3| 4671|Drosophila melanogaster CG9492-PA
            protein.
          Length = 4671

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
 Frame = -2

Query: 236  LVTVHVFYRSVFKKLCLLRLTSDFRVV*SRRCLFCYF--ITKRMFCEIENFKFXXXX*YV 63
            L+T+HV  R +F  LC + + S       ++C F YF     + +  + +  F     Y+
Sbjct: 1885 LITIHVHQRDIFDILCRMNIKSANDFEWLKQCRF-YFKEDLDKTWISVTDVTFTYQNEYL 1943

Query: 62   GIT 54
            G T
Sbjct: 1944 GCT 1946


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,704,596
Number of Sequences: 53049
Number of extensions: 336868
Number of successful extensions: 536
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)