Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_P17
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical pr... 279 2e-75
Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical pr... 246 1e-65
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical pr... 29 3.8
X75331-1|CAA53080.1| 620|Caenorhabditis elegans acetylcholinest... 29 3.8
U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal acetyl... 29 3.8
U40417-9|AAA81417.2| 120|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate perme... 28 5.0
Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain sp... 27 8.7
>Z68343-3|CAA92778.1| 412|Caenorhabditis elegans Hypothetical
protein F59B8.2 protein.
Length = 412
Score = 279 bits (683), Expect = 2e-75
Identities = 130/173 (75%), Positives = 146/173 (84%), Gaps = 1/173 (0%)
Frame = +1
Query: 130 DEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCAT 309
DEMTRIIWDLIKEKLILP++D+ +H +DLG+E+RD TDDQVTID A A KYNV +KCAT
Sbjct: 17 DEMTRIIWDLIKEKLILPYVDLNVHFFDLGIEHRDATDDQVTIDAANATLKYNVAVKCAT 76
Query: 310 ITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAH 489
ITPDE RVEEFKLKKMWKSPNGTIRNILGGTVFRE II KN+PRLV W KPIIIGRHAH
Sbjct: 77 ITPDEARVEEFKLKKMWKSPNGTIRNILGGTVFREPIIVKNVPRLVNTWSKPIIIGRHAH 136
Query: 490 ADQYKATDFVVPGAGTLEIIFKPESG-EAIKHVVHEYKGAGVALAMFNTDASI 645
ADQYKATDFVVPGAG LEI F G + I+ V ++KG GV+L+M+NTD SI
Sbjct: 137 ADQYKATDFVVPGAGKLEIKFVSADGTQTIQETVFDFKGPGVSLSMYNTDDSI 189
>Z81479-7|CAB03943.1| 435|Caenorhabditis elegans Hypothetical
protein C34F6.8 protein.
Length = 435
Score = 246 bits (601), Expect = 1e-65
Identities = 113/173 (65%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
Frame = +1
Query: 130 DEMTRIIWDLIKEKLILPFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCAT 309
DEMTRIIW IK KLILP+LD+++ YDLG+E RD+T+DQVTID A AI +++VGIKCAT
Sbjct: 39 DEMTRIIWKEIKNKLILPYLDLDIKYYDLGLEYRDETNDQVTIDAAHAILEHSVGIKCAT 98
Query: 310 ITPDEKRVEEFKLKKMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWDKPIIIGRHAH 489
ITPDE R++EF LKKMW SPNGTIRNILGGTVFRE I+CKNIPRLV GW +PI IGRHA
Sbjct: 99 ITPDEARIKEFNLKKMWLSPNGTIRNILGGTVFREPILCKNIPRLVPGWTQPITIGRHAF 158
Query: 490 ADQYKATDFVVPGAGTLEIIFKPESGEAIKHVVHEY-KGAGVALAMFNTDASI 645
DQYK TD V+P TL+++ G H V+++ K GV LAM+NTD SI
Sbjct: 159 GDQYKCTDLVIPSGSTLQLLVNKPDGSKDVHNVYDFKKSGGVGLAMYNTDESI 211
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +1
Query: 181 PFLDIELHVYDLGMENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKKMW 360
P +D V ++ R + + + KK+ + T+ PDE+ VE KL K
Sbjct: 2175 PDVDDSEDVEEIMRRPRKRIGPKEEVVLLSVTKKHPHSYRTKTV-PDEEPVEIVKLVKNR 2233
Query: 361 KSPNGTIRNI 390
+ PN T+R +
Sbjct: 2234 RLPNATLREV 2243
>Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical
protein T26H8.4 protein.
Length = 561
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = -2
Query: 339 FFNSLLIRSYGRTFDAHIVFLYGLSTINCNLIISLITIFH 220
F+NSL I S TF +F+ STI+ + +I LI IFH
Sbjct: 59 FYNSLSISS---TFP--FIFMTEFSTISTSFLILLIAIFH 93
>X75331-1|CAA53080.1| 620|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 620
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -1
Query: 277 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 167
+WP++N + +++ + + YPS + + PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560
>U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal
acetylcholinesterase protein1 protein.
Length = 620
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = -1
Query: 277 LWPQHNQL*LDHQSYH-DFPYPSRRHVIQCPRKEESAF 167
+WP++N + +++ + + YPS + + PR++E AF
Sbjct: 523 VWPKYNSVSMEYMNMTVESSYPSMKRIGHGPRRKECAF 560
>U40417-9|AAA81417.2| 120|Caenorhabditis elegans Hypothetical
protein T08A9.13 protein.
Length = 120
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = +1
Query: 220 MENRDKTDDQVTIDCAEAIKKYNVGIKCATITPDEKRVEEFKLKK 354
++ + + + ++C +A+ +Y+V K T+T E++ E KK
Sbjct: 44 LQKAKELEQRTRVECQQALDQYDVLKKIPTLTEQERKENETLTKK 88
>AF043704-3|AAK21473.2| 823|Caenorhabditis elegans Sulfate permease
family protein 6 protein.
Length = 823
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +1
Query: 490 ADQYKATDFVVPGAGTLEIIFKPESGE-AIKHVVHEYKGAGVALAMFNTDASI 645
ADQY+ ++ T II+ G+ A+K V ++YK G+++ NT+ +
Sbjct: 650 ADQYERLTHIIIDCST--IIYVDLMGQGALKDVYNDYKTIGISVLFANTNEHV 700
>Z81570-7|CAB04608.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 304 ATITPDEKRVE--EFKLKKMWKSPNGTIRNILGGTVF-REAIICKNIPRLVTGW--DKPI 468
A + KRV+ E +L++ W+S GT++ +L ++ EA+ C+ W DK
Sbjct: 2591 AEVQRAHKRVQNSEHQLRQTWESEKGTLQKLLEWMLWCDEAVQCEQ-------WLSDKET 2643
Query: 469 IIGRHAHADQYKATDFVVPGAGTLEIIFKPES 564
+ R D A + ++ G E + +S
Sbjct: 2644 QVARGELGDTTDAVEMLIKGHSAFEETVRKQS 2675
>Z75956-5|CAB00130.2| 4063|Caenorhabditis elegans Hypothetical protein
R31.1 protein.
Length = 4063
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 304 ATITPDEKRVE--EFKLKKMWKSPNGTIRNILGGTVF-REAIICKNIPRLVTGW--DKPI 468
A + KRV+ E +L++ W+S GT++ +L ++ EA+ C+ W DK
Sbjct: 2591 AEVQRAHKRVQNSEHQLRQTWESEKGTLQKLLEWMLWCDEAVQCEQ-------WLSDKET 2643
Query: 469 IIGRHAHADQYKATDFVVPGAGTLEIIFKPES 564
+ R D A + ++ G E + +S
Sbjct: 2644 QVARGELGDTTDAVEMLIKGHSAFEETVRKQS 2675
>AF053496-1|AAC08577.1| 4063|Caenorhabditis elegans beta chain
spectrin homolog Sma1 protein.
Length = 4063
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Frame = +1
Query: 304 ATITPDEKRVE--EFKLKKMWKSPNGTIRNILGGTVF-REAIICKNIPRLVTGW--DKPI 468
A + KRV+ E +L++ W+S GT++ +L ++ EA+ C+ W DK
Sbjct: 2591 AEVQRAHKRVQNSEHQLRQTWESEKGTLQKLLEWMLWCDEAVQCEQ-------WLSDKET 2643
Query: 469 IIGRHAHADQYKATDFVVPGAGTLEIIFKPES 564
+ R D A + ++ G E + +S
Sbjct: 2644 QVARGELGDTTDAVEMLIKGHSAFEETVRKQS 2675
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,955,747
Number of Sequences: 27780
Number of extensions: 330999
Number of successful extensions: 888
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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