Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_P16
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L34587-1|AAA67650.1| 112|Homo sapiens RNA polymerase II elongat... 224 2e-58
BC100283-1|AAI00284.1| 112|Homo sapiens transcription elongatio... 224 2e-58
BC100028-1|AAI00029.1| 112|Homo sapiens TCEB1 protein protein. 224 2e-58
BC093065-1|AAH93065.1| 112|Homo sapiens TCEB1 protein protein. 224 2e-58
BC013809-1|AAH13809.1| 112|Homo sapiens transcription elongatio... 224 2e-58
AC005756-1|AAC62260.1| 120|Homo sapiens fos39347_1 protein. 130 6e-30
Z47087-1|CAA87392.1| 163|Homo sapiens RNA polymerase II elongat... 36 0.095
U33760-1|AAC50241.1| 163|Homo sapiens cyclin A/CDK2-associated ... 36 0.095
BC065730-1|AAH65730.1| 163|Homo sapiens S-phase kinase-associat... 36 0.095
BC025673-1|AAH25673.1| 160|Homo sapiens S-phase kinase-associat... 36 0.095
BC020798-1|AAH20798.1| 163|Homo sapiens S-phase kinase-associat... 36 0.095
BC009839-1|AAH09839.1| 163|Homo sapiens S-phase kinase-associat... 36 0.095
U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog o... 31 2.7
>L34587-1|AAA67650.1| 112|Homo sapiens RNA polymerase II elongation
factor SIII, p15 subunit protein.
Length = 112
Score = 224 bits (548), Expect = 2e-58
Identities = 103/109 (94%), Positives = 105/109 (96%)
Frame = +1
Query: 202 EEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFR 381
EEK YGGCEGPDAMYVKL+SSDGHEFIVKREHAL SGTIKAMLSGPGQFAENE NEVNFR
Sbjct: 4 EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63
Query: 382 EIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 528
EIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 64 EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>BC100283-1|AAI00284.1| 112|Homo sapiens transcription elongation
factor B (SIII), polypeptide 1 (15kDa, elongin C)
protein.
Length = 112
Score = 224 bits (548), Expect = 2e-58
Identities = 103/109 (94%), Positives = 105/109 (96%)
Frame = +1
Query: 202 EEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFR 381
EEK YGGCEGPDAMYVKL+SSDGHEFIVKREHAL SGTIKAMLSGPGQFAENE NEVNFR
Sbjct: 4 EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63
Query: 382 EIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 528
EIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 64 EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>BC100028-1|AAI00029.1| 112|Homo sapiens TCEB1 protein protein.
Length = 112
Score = 224 bits (548), Expect = 2e-58
Identities = 103/109 (94%), Positives = 105/109 (96%)
Frame = +1
Query: 202 EEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFR 381
EEK YGGCEGPDAMYVKL+SSDGHEFIVKREHAL SGTIKAMLSGPGQFAENE NEVNFR
Sbjct: 4 EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63
Query: 382 EIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 528
EIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 64 EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>BC093065-1|AAH93065.1| 112|Homo sapiens TCEB1 protein protein.
Length = 112
Score = 224 bits (548), Expect = 2e-58
Identities = 103/109 (94%), Positives = 105/109 (96%)
Frame = +1
Query: 202 EEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFR 381
EEK YGGCEGPDAMYVKL+SSDGHEFIVKREHAL SGTIKAMLSGPGQFAENE NEVNFR
Sbjct: 4 EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63
Query: 382 EIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 528
EIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 64 EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>BC013809-1|AAH13809.1| 112|Homo sapiens transcription elongation
factor B (SIII), polypeptide 1 (15kDa, elongin C)
protein.
Length = 112
Score = 224 bits (548), Expect = 2e-58
Identities = 103/109 (94%), Positives = 105/109 (96%)
Frame = +1
Query: 202 EEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFR 381
EEK YGGCEGPDAMYVKL+SSDGHEFIVKREHAL SGTIKAMLSGPGQFAENE NEVNFR
Sbjct: 4 EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63
Query: 382 EIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLDC 528
EIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAPEIALE+LMAANFLDC
Sbjct: 64 EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112
>AC005756-1|AAC62260.1| 120|Homo sapiens fos39347_1 protein.
Length = 120
Score = 130 bits (313), Expect = 6e-30
Identities = 71/111 (63%), Positives = 79/111 (71%), Gaps = 3/111 (2%)
Frame = +1
Query: 202 EEKVYGGCEGPDAMYVKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFR 381
EEK G GPDAM KLVSSD +FIVKREH SG KA+LSGPGQ AENE ++VNFR
Sbjct: 4 EEKSCSGYGGPDAMDGKLVSSDDDDFIVKREHTRASGIRKAVLSGPGQSAENETDQVNFR 63
Query: 382 EIPSHVL---QKVCMYFTYKVRYTNSSTEIPEFPIAPEIALEVLMAANFLD 525
EIP K C+YFTYKV Y+NSSTEIPEF ALEVLMA++FLD
Sbjct: 64 EIPPRCYPKHAKACIYFTYKVHYSNSSTEIPEF----LTALEVLMASDFLD 110
>Z47087-1|CAA87392.1| 163|Homo sapiens RNA polymerase II elongation
factor-like protein protein.
Length = 163
Score = 36.3 bits (80), Expect = 0.095
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +1
Query: 247 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYFT 426
+KL SSDG F V E A S TIK ML G E + + V + + +L+KV + T
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 427 Y 429
+
Sbjct: 64 H 64
>U33760-1|AAC50241.1| 163|Homo sapiens cyclin A/CDK2-associated p19
protein.
Length = 163
Score = 36.3 bits (80), Expect = 0.095
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +1
Query: 247 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYFT 426
+KL SSDG F V E A S TIK ML G E + + V + + +L+KV + T
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 427 Y 429
+
Sbjct: 64 H 64
>BC065730-1|AAH65730.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 36.3 bits (80), Expect = 0.095
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +1
Query: 247 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYFT 426
+KL SSDG F V E A S TIK ML G E + + V + + +L+KV + T
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 427 Y 429
+
Sbjct: 64 H 64
>BC025673-1|AAH25673.1| 160|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 160
Score = 36.3 bits (80), Expect = 0.095
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +1
Query: 247 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYFT 426
+KL SSDG F V E A S TIK ML G E + + V + + +L+KV + T
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 427 Y 429
+
Sbjct: 64 H 64
>BC020798-1|AAH20798.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 36.3 bits (80), Expect = 0.095
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +1
Query: 247 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYFT 426
+KL SSDG F V E A S TIK ML G E + + V + + +L+KV + T
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 427 Y 429
+
Sbjct: 64 H 64
>BC009839-1|AAH09839.1| 163|Homo sapiens S-phase kinase-associated
protein 1A (p19A) protein.
Length = 163
Score = 36.3 bits (80), Expect = 0.095
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +1
Query: 247 VKLVSSDGHEFIVKREHALISGTIKAMLSGPGQFAENEANEVNFREIPSHVLQKVCMYFT 426
+KL SSDG F V E A S TIK ML G E + + V + + +L+KV + T
Sbjct: 4 IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63
Query: 427 Y 429
+
Sbjct: 64 H 64
>U08377-1|AAA19604.1| 951|Homo sapiens protein ( Human homolog of
Drosophila splicing regulator
suppressor-of-white-apricot mRNA, complete cds. ).
Length = 951
Score = 31.5 bits (68), Expect = 2.7
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +2
Query: 353 KMKLTRSTLERYHHTYSKKSACTSRTRYAIPTRLQRYQSFRSLPRSPSK 499
K TRS +YH + +S S+ ++++P+ + + RS RSP +
Sbjct: 763 KRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRR 811
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,893,087
Number of Sequences: 237096
Number of extensions: 1910329
Number of successful extensions: 6255
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6248
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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