Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_P12
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 118 2e-27
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 118 2e-27
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 109 2e-24
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 109 2e-24
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 109 2e-24
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 109 2e-24
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 109 2e-24
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 75 3e-14
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 66 2e-11
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 48 5e-06
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 44 1e-04
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 38 0.006
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.007
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 38 0.007
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 33 0.21
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 33 0.21
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 32 0.37
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 31 0.86
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 30 1.1
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 28 6.0
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 28 6.0
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 8.0
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 118 bits (285), Expect = 2e-27
Identities = 58/133 (43%), Positives = 79/133 (59%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXX 273
V ++ + ++K KI+ EGIP +QRL +AG+QLED SD I E+T+++
Sbjct: 15 VAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
Query: 274 XXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVME 453
Y+TP LAVL++YK+DENGKI RLR+EC CG GVFMA
Sbjct: 71 AKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHA 130
Query: 454 DRHYCGKCHSTMV 492
+RHYCG+CH T+V
Sbjct: 131 NRHYCGRCHDTLV 143
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 118 bits (285), Expect = 2e-27
Identities = 58/133 (43%), Positives = 79/133 (59%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVXXXXXX 273
V ++ + ++K KI+ EGIP +QRL +AG+QLED SD I E+T+++
Sbjct: 15 VAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
Query: 274 XXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVME 453
Y+TP LAVL++YK+DENGKI RLR+EC CG GVFMA
Sbjct: 71 AKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHA 130
Query: 454 DRHYCGKCHSTMV 492
+RHYCG+CH T+V
Sbjct: 131 NRHYCGRCHDTLV 143
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 17 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 17 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 93 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 169 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 245 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 321 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 397 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 62.5 bits (145), Expect = 2e-10
Identities = 29/31 (93%), Positives = 30/31 (96%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 186
VE SDTIENVKAKIQDKEGIPP+QQRLIFAG
Sbjct: 473 VEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 305 MQIFVKTLTGKTITL 319
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 457 MQIFVKTLTGKTITL 471
Score = 30.7 bits (66), Expect = 0.86
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTL GKTITL
Sbjct: 381 MQIFVKTLIGKTITL 395
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 17 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 93 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 169 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 245 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 321 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 397 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 473 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 549 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 625 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 701 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 777 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 830
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 305 MQIFVKTLTGKTITL 319
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 457 MQIFVKTLTGKTITL 471
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 533 MQIFVKTLTGKTITL 547
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 609 MQIFVKTLTGKTITL 623
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 685 MQIFVKTLTGKTITL 699
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 761 MQIFVKTLTGKTITL 775
Score = 30.7 bits (66), Expect = 0.86
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTL GKTITL
Sbjct: 381 MQIFVKTLIGKTITL 395
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 17 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 93 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 169 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 245 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 321 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 397 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 473 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 549 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 625 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 701 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 107 bits (258), Expect = 5e-24
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK+STLHLV
Sbjct: 777 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLV 830
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 77 MQIFVKTLTGKTITL 91
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 153 MQIFVKTLTGKTITL 167
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 229 MQIFVKTLTGKTITL 243
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 305 MQIFVKTLTGKTITL 319
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 381 MQIFVKTLTGKTITL 395
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 457 MQIFVKTLTGKTITL 471
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 533 MQIFVKTLTGKTITL 547
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 609 MQIFVKTLTGKTITL 623
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 685 MQIFVKTLTGKTITL 699
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 761 MQIFVKTLTGKTITL 775
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 109 bits (261), Expect = 2e-24
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
VE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 17 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 75.4 bits (177), Expect = 3e-14
Identities = 31/54 (57%), Positives = 42/54 (77%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
+EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY + S LHLV
Sbjct: 17 IEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 65.7 bits (153), Expect = 2e-11
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 255
++ +DT+E +K K+Q+K G+PP+QQRLIF QLE+ R L YNI+ E +HLV
Sbjct: 177 IKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
Score = 36.3 bits (80), Expect = 0.017
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 252
VE SD I+++ K+ + + P ++ +D RT+SDYNI+ STL L
Sbjct: 105 VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTLRL 153
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 48.0 bits (109), Expect = 5e-06
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 246
+ DT+ ++K I+ + IP + L F+GK+LED ++ DYNIQK ST+
Sbjct: 169 IHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTI 219
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIP 156
VE SDTIENVKAKIQDKEGIP
Sbjct: 17 VEASDTIENVKAKIQDKEGIP 37
Score = 33.1 bits (72), Expect = 0.16
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 45 MQIFVKTLTGKTITL 89
MQIFVKTLTGKTITL
Sbjct: 1 MQIFVKTLTGKTITL 15
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 252
V SDTI VK I + + R++ K LED TL+ YNIQ+ STL L
Sbjct: 189 VRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 37.9 bits (84), Expect = 0.006
Identities = 18/50 (36%), Positives = 30/50 (60%)
Frame = +1
Query: 103 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 252
SDTI ++K +I + + R++ GK LED +L+ YNIQ+ + + L
Sbjct: 215 SDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 103 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 246
SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 181 SDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 37.5 bits (83), Expect = 0.007
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Frame = +1
Query: 103 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE---DGRTLSDYNIQKESTLHL 252
SDT+ +VKAKI +K I PN Q+L+ L+ D TL D + + STL L
Sbjct: 121 SDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDNSFENGSTLRL 173
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/53 (24%), Positives = 32/53 (60%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 252
++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L
Sbjct: 593 IQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/53 (24%), Positives = 32/53 (60%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 252
++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L
Sbjct: 593 IQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYL 645
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +1
Query: 106 DTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 222
+++E +K KI+ + GIP + L GK L D + L+DY
Sbjct: 163 ESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 30.7 bits (66), Expect = 0.86
Identities = 13/52 (25%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYNIQKESTL 246
++ +T+ +K +I+ + + N+Q L+F G +L+D +T++D I ++ +
Sbjct: 38 MKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKI 89
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 94 VEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 189
V ++ + ++K KI+ EGIP +QRL +A +
Sbjct: 15 VAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 259 STPGGGWIPSGYCSPRGYVHLPAA 188
S PGG +PSG +G +H+P A
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRA 1281
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 259 STPGGGWIPSGYCSPRGYVHLPAA 188
S PGG +PSG +G +H+P A
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRA 1374
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 259 STPGGGWIPSGYCSPRGYVHLPAA 188
S PGG +PSG +G +H+P A
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRA 1374
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 259 STPGGGWIPSGYCSPRGYVHLPAA 188
S PGG +PSG +G +H+P A
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRA 1374
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 259 STPGGGWIPSGYCSPRGYVHLPAA 188
S PGG +PSG +G +H+P A
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRA 1281
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 259 STPGGGWIPSGYCSPRGYVHLPAA 188
S PGG +PSG +G +H+P A
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRA 1374
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 259 STPGGGWIPSGYCSPRGYVHLPAA 188
S PGG +PSG +G +H+P A
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRA 1374
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 259 STPGGGWIPSGYCSPRGYVHLPAA 188
S PGG +PSG +G +H+P A
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRA 1374
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 259 STPGGGWIPSGYCSPRGYVHLPAA 188
S PGG +PSG +G +H+P A
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRA 1373
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.5 bits (58), Expect = 8.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 172 LIFAGKQLEDGRTLSDYNIQKESTLHL 252
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,529,807
Number of Sequences: 27780
Number of extensions: 270886
Number of successful extensions: 833
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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