Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP10_F_P09
(649 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 227 2e-58
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 212 5e-54
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 200 2e-50
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 190 3e-47
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 184 1e-45
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 182 9e-45
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 180 2e-44
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 177 2e-43
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 176 4e-43
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 170 3e-41
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 170 3e-41
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 168 9e-41
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 168 9e-41
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 167 3e-40
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 155 1e-36
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 151 1e-35
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 151 1e-35
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 150 3e-35
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 146 4e-34
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 144 1e-33
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 140 3e-32
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 140 3e-32
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 138 8e-32
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 134 2e-30
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 131 2e-29
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 131 2e-29
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 131 2e-29
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 131 2e-29
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 128 1e-28
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 123 4e-27
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 122 6e-27
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 114 2e-24
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 107 2e-22
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 104 2e-21
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 103 4e-21
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 99 5e-20
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 90 4e-17
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 88 2e-16
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 84 2e-15
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 83 7e-15
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 81 2e-14
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 81 2e-14
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 77 4e-13
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 76 9e-13
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 75 1e-12
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 75 2e-12
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 73 5e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 8e-12
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 72 1e-11
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 72 1e-11
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 70 6e-11
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 70 6e-11
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 70 6e-11
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 68 2e-10
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 67 3e-10
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 65 1e-09
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 64 4e-09
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 64 4e-09
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 64 4e-09
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 64 4e-09
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 62 1e-08
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 62 1e-08
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 61 2e-08
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 61 2e-08
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 60 3e-08
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 60 5e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 8e-08
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 56 7e-07
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 56 1e-06
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 55 1e-06
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 54 2e-06
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 54 3e-06
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 54 4e-06
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 52 9e-06
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 50 4e-05
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 50 5e-05
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 50 5e-05
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 49 1e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 3e-04
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 47 3e-04
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 47 3e-04
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 47 3e-04
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 47 5e-04
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 46 6e-04
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 46 8e-04
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 44 0.002
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 44 0.003
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 43 0.006
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 43 0.006
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 42 0.017
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.039
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 40 0.052
UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2; Ya... 40 0.069
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 39 0.091
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 39 0.12
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 38 0.16
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 36 0.84
UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 36 0.84
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 36 1.1
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 34 2.6
UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3 pre... 34 2.6
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 33 4.5
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 33 6.0
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 7.9
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 227 bits (554), Expect = 2e-58
Identities = 123/215 (57%), Positives = 130/215 (60%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 183
+YSTNHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 4 LYSTNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMI 63
Query: 184 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 363
N LVPL+LGAPD+AFPR+NN+ F IVENGAGTG
Sbjct: 64 FFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGW 123
Query: 364 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 543
TVYPPLSSNIAH G SVDLAIFSLHLAGISS SFDQ+PLFV
Sbjct: 124 TVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPLFVW 183
Query: 544 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
AVGITAF AGAIT+LLTDRNLNTSFFD
Sbjct: 184 AVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFD 218
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 212 bits (518), Expect = 5e-54
Identities = 116/205 (56%), Positives = 135/205 (65%)
Frame = -3
Query: 647 SKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXX 468
SK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I +R
Sbjct: 14 SKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFT 73
Query: 467 XXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQN 288
I+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QN
Sbjct: 74 APKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQN 133
Query: 287 LILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SSPINDPGFP 108
L+LFIRGNA+SGAP++ GTNQFPNPP KA AVT+ L I S PI PG P
Sbjct: 134 LMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLPGCP 192
Query: 107 NSARIKSLKDVPIIPDQIPKIKYNV 33
NSARIKSL DVP +P PK+KYNV
Sbjct: 193 NSARIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 200 bits (488), Expect = 2e-50
Identities = 107/182 (58%), Positives = 115/182 (63%)
Frame = +1
Query: 103 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 282
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFPR+NN
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 283 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 462
+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132
Query: 463 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 642
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSF
Sbjct: 133 GAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSF 192
Query: 643 FD 648
FD
Sbjct: 193 FD 194
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 190 bits (463), Expect = 3e-47
Identities = 106/215 (49%), Positives = 120/215 (55%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 183
++STNHKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 8 LFSTNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMI 67
Query: 184 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 363
N LVPL++GAPD+AFPR+NN+ F VE GAGTG
Sbjct: 68 FFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGW 127
Query: 364 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 543
TVYPPL+ N+AH G SVDLAIFSLHLAGISS S Q PLFV
Sbjct: 128 TVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVW 187
Query: 544 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
+V ITA A IT+LLTDRNLNT+FFD
Sbjct: 188 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFD 222
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 184 bits (449), Expect = 1e-45
Identities = 102/214 (47%), Positives = 116/214 (54%)
Frame = +1
Query: 7 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 186
+STNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 187 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 366
N LVPL++GAPD+AFPR+NN+ F VE GAGTG T
Sbjct: 68 FMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT 127
Query: 367 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 546
VYPPL+ N+AH G SVDL IFSLHLAG+SS S Q PLFV A
Sbjct: 128 VYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWA 187
Query: 547 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V +TA A IT+LLTDRNLNT+FFD
Sbjct: 188 VLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFD 221
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 182 bits (442), Expect = 9e-45
Identities = 100/214 (46%), Positives = 116/214 (54%)
Frame = +1
Query: 7 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 186
+STNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67
Query: 187 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 366
N LVPL++GAPD+AFPR+NN+ F VE GAGTG T
Sbjct: 68 FMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT 127
Query: 367 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 546
VYPPL+ N+AH G SVDL IFSLHLAG+SS + Q PLFV +
Sbjct: 128 VYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWS 187
Query: 547 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V +TA A IT+LLTDRNLNT+FFD
Sbjct: 188 VLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFD 221
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 180 bits (439), Expect = 2e-44
Identities = 99/215 (46%), Positives = 117/215 (54%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 183
++STNHKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 7 LFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMI 66
Query: 184 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 363
N LVPL++GAPD+AFPR+NN+ F +VE GAGTG
Sbjct: 67 FFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGW 126
Query: 364 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 543
TVYPPL+ N +H G SVDL IFSLHLAG+SS + Q PLFV
Sbjct: 127 TVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVW 186
Query: 544 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
+V ITA A IT+LLTDRNLNT+FFD
Sbjct: 187 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFD 221
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 177 bits (430), Expect = 2e-43
Identities = 99/210 (47%), Positives = 112/210 (53%)
Frame = +1
Query: 19 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 198
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 199 XXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPP 378
N L+PL++GAPD+AFPR+NN+ F +E GAGTG TVYPP
Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPP 120
Query: 379 LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 558
L+ N+AH G SVDL IFSLHLAGISS S Q PLFV AV IT
Sbjct: 121 LAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLIT 180
Query: 559 AFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
A A IT+LLTDRNLNT+FFD
Sbjct: 181 AVLLLLSLPVLAAGITMLLTDRNLNTTFFD 210
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 176 bits (428), Expect = 4e-43
Identities = 95/214 (44%), Positives = 115/214 (53%)
Frame = +1
Query: 7 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 186
+S NHKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 9 FSCNHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIF 68
Query: 187 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 366
N VPL++GAPD+AFPR+NNI F +VE GAGTG T
Sbjct: 69 FLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWT 128
Query: 367 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 546
VYPPL+S AH G SVD+AIFSLHLAG+SS + ++PLFV +
Sbjct: 129 VYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWS 188
Query: 547 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V ITA AGAIT+LLTDR NT+FFD
Sbjct: 189 VLITAILLLLSLPVLAGAITMLLTDRYFNTTFFD 222
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 170 bits (413), Expect = 3e-41
Identities = 97/217 (44%), Positives = 113/217 (52%), Gaps = 2/217 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 177
+YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N LVP+++GAPD+AFPR+NNI F VE GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V A+ +TA AGAIT+LLTDRN NTSF+D
Sbjct: 185 VWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYD 221
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 170 bits (413), Expect = 3e-41
Identities = 97/217 (44%), Positives = 113/217 (52%), Gaps = 2/217 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 177
+YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N LVP+++GAPD+AFPR+NNI F VE GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V A+ +TA AGAIT+LLTDRN NTSF+D
Sbjct: 185 VWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYD 221
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 168 bits (409), Expect = 9e-41
Identities = 91/182 (50%), Positives = 104/182 (57%)
Frame = +1
Query: 103 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 282
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFPR+NN
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 283 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 462
+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSIL 142
Query: 463 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 642
+ + LFV +V ITA AGAIT+LLTDRN NTSF
Sbjct: 143 GAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSF 202
Query: 643 FD 648
FD
Sbjct: 203 FD 204
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 168 bits (409), Expect = 9e-41
Identities = 92/217 (42%), Positives = 115/217 (52%), Gaps = 2/217 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXX 177
++STNHKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 8 LFSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFL 67
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N VP+++GAPD+AFPR+NNI F +VE G+GT
Sbjct: 68 MIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGT 127
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G TVYPPLS +H G +VDLAIFSLHL+G+SS + +LPLF
Sbjct: 128 GWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLF 187
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V +V +TAF AGAIT+LLTDRN NT+FFD
Sbjct: 188 VWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFD 224
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 167 bits (405), Expect = 3e-40
Identities = 93/217 (42%), Positives = 116/217 (53%), Gaps = 2/217 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 177
I+STNHKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 13 IFSTNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFL 72
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N LVP+++G+PD+AFPR+NNI F +VE G GT
Sbjct: 73 MIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGT 132
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G TVYPPLSS +H G +VDLAIFSLH++G SS S ++PLF
Sbjct: 133 GWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLF 192
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V ++ +TAF AGAIT+LLTDRN NTSFFD
Sbjct: 193 VWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFD 229
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 155 bits (375), Expect = 1e-36
Identities = 84/182 (46%), Positives = 102/182 (56%)
Frame = +1
Query: 103 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 282
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FPR+NN
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83
Query: 283 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 462
+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143
Query: 463 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 642
+ D++ LF +V ITA AGAIT+LLTDRN+NTSF
Sbjct: 144 GAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSF 203
Query: 643 FD 648
FD
Sbjct: 204 FD 205
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 151 bits (367), Expect = 1e-35
Identities = 89/217 (41%), Positives = 107/217 (49%), Gaps = 2/217 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 177
+YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N L+PL++GA D AFPRINNI F +VE+GAGT
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGT 125
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G TVYPPLSS AH G SVDLAIF+LHL ISS + +LPLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V ++ ITAF + IT+LL DRN NTSFF+
Sbjct: 186 VWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFE 222
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 151 bits (367), Expect = 1e-35
Identities = 89/217 (41%), Positives = 107/217 (49%), Gaps = 2/217 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 177
+YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N L+PL++GA D AFPRINNI F +VE+GAGT
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGT 125
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G TVYPPLSS AH G SVDLAIF+LHL ISS + +LPLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V ++ ITAF + IT+LL DRN NTSFF+
Sbjct: 186 VWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFE 222
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 150 bits (363), Expect = 3e-35
Identities = 87/217 (40%), Positives = 108/217 (49%), Gaps = 2/217 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 177
+YSTN KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVL 65
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N ++PL++GA D++FPRIN+I F +VE+GAGT
Sbjct: 66 MIFFLAMPALIGGFGNYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGT 125
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G TVYPPLSS AH G SVDLAIFSLHL ISS S ++PLF
Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLF 185
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V A+ ITAF + IT+LL DRN NTSFF+
Sbjct: 186 VWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFE 222
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 146 bits (354), Expect = 4e-34
Identities = 86/214 (40%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 186
S+N KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 9 SSNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIF 68
Query: 187 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 366
N L+PL LG PD+ FPR+NNI + +ENG GTG T
Sbjct: 69 FMVMPALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWT 128
Query: 367 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 546
+YPPLS +H G SVDLAIF LHL+GISS +L LF A
Sbjct: 129 LYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWA 188
Query: 547 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V ITA AG IT++LTDRN NTSFF+
Sbjct: 189 VVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFE 222
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 144 bits (350), Expect = 1e-33
Identities = 84/217 (38%), Positives = 106/217 (48%), Gaps = 2/217 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 177
+YSTN KDI LY EL PG L G++Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAIL 65
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N ++PL++GA D AFPRINNI F +VE+GAGT
Sbjct: 66 MIFFMVMPALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGT 125
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G TVYPPL+S AH G SVDLAIF+LH+ ISS + +LPLF
Sbjct: 126 GWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V A+ ITA + +T+LL DRN NTSFF+
Sbjct: 186 VWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFE 222
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 140 bits (339), Expect = 3e-32
Identities = 80/214 (37%), Positives = 102/214 (47%), Gaps = 1/214 (0%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 186
S+N KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 35 SSNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIF 94
Query: 187 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 366
N L+P+++G PD+AFPR+NN+ + I+ENG GTG T
Sbjct: 95 FMVMPALIGGFGNFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWT 154
Query: 367 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 546
+YPPLS +H VDL IF LHL+GISS +L LF A
Sbjct: 155 LYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWA 214
Query: 547 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V ITA A AIT+LLTDRNLNTSF++
Sbjct: 215 VVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYE 248
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 140 bits (339), Expect = 3e-32
Identities = 83/200 (41%), Positives = 97/200 (48%), Gaps = 2/200 (1%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 177
+YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N LVP+++GAPD+AFPR+NNI F VE GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G TVYPPLS +H G SVDLAIFSLHL+GISS + +LPLF
Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184
Query: 538 V*AVGITAFXXXXXXXXXAG 597
V A+ +TA AG
Sbjct: 185 VWAIFVTAILLLLSLPVLAG 204
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 138 bits (335), Expect = 8e-32
Identities = 82/217 (37%), Positives = 97/217 (44%), Gaps = 2/217 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 177
I++TNHK IG LY EL PG L G+ YN I T H
Sbjct: 9 IFTTNHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVL 68
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N VP+++GAPD++FPR+NN F E G GT
Sbjct: 69 MLFVVVMPILFGGFGNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGT 128
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G TVYPPLSS +H G SVDL IFS HL GI S LPLF
Sbjct: 129 GWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLF 188
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V +V +T+F A AIT+LL DRN NTSF+D
Sbjct: 189 VWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYD 225
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 134 bits (323), Expect = 2e-30
Identities = 80/217 (36%), Positives = 102/217 (47%), Gaps = 2/217 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 177
++STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAIL 70
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N L+PL+LGA D+AF R+NNI F +VE GAGT
Sbjct: 71 MIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGT 130
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G TVY PL+ +H G +VDLAIFSLHL+G SS ++ +PLF
Sbjct: 131 GWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLF 190
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
AV TA A +T+ + DRN NTSFF+
Sbjct: 191 AWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFE 227
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 131 bits (316), Expect = 2e-29
Identities = 75/216 (34%), Positives = 105/216 (48%), Gaps = 2/216 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXX 177
++STN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N LVPL +G+ D AFPRINN+ F +++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
V +V ITA A +T+LL DRN NTSFF
Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 131 bits (316), Expect = 2e-29
Identities = 75/216 (34%), Positives = 105/216 (48%), Gaps = 2/216 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXX 177
++STN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N LVPL +G+ D AFPRINN+ F +++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
V +V ITA A +T+LL DRN NTSFF
Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 131 bits (316), Expect = 2e-29
Identities = 75/216 (34%), Positives = 105/216 (48%), Gaps = 2/216 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXX 177
++STN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N LVPL +G+ D AFPRINN+ F +++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
V +V ITA A +T+LL DRN NTSFF
Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 131 bits (316), Expect = 2e-29
Identities = 75/216 (34%), Positives = 105/216 (48%), Gaps = 2/216 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXX 177
++STN ++I LY EL NP L+ + Q++N ++TAHA
Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N LVPL +G+ D AFPRINN+ F +++ G G+
Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
G T+YPPL+S +H G S+D+AIF+LHL+G+SS + +LPLF
Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
V +V ITA A +T+LL DRN NTSFF
Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFF 238
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 128 bits (309), Expect = 1e-28
Identities = 80/218 (36%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 186
STN KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 37 STNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIF 96
Query: 187 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 366
N L+PL++G PD+AFPR+NNI F I+E G GTG T
Sbjct: 97 FMVMPALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWT 156
Query: 367 V----YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 534
+ YPPLS +H G SVDLAIF+LHL+G+SS +L L
Sbjct: 157 LLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLAL 216
Query: 535 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
F + IT++LTDRN NTSFF+
Sbjct: 217 F-------GWATWSSRSRYFLGITMVLTDRNFNTSFFE 247
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 123 bits (296), Expect = 4e-27
Identities = 85/233 (36%), Positives = 106/233 (45%), Gaps = 20/233 (8%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY- 147
STNHKDIGTLY AEL PG + D DQ Y
Sbjct: 33 STNHKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYH 92
Query: 148 --NTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 321
N ++TAH N VP+++GAPD+AFPR+NNI F
Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152
Query: 322 XXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 489
V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTI 211
Query: 490 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
+ ++PLFV +V +TAF A AIT+LLTDRN T+F+D
Sbjct: 212 LNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYD 264
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 122 bits (295), Expect = 6e-27
Identities = 70/137 (51%), Positives = 79/137 (57%)
Frame = +1
Query: 238 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 417
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 418 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 597
LAIFSLH+AG+ S + ++PLFV AV ITA AG
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123
Query: 598 AITILLTDRNLNTSFFD 648
AIT+LLTDRN+NTSFFD
Sbjct: 124 AITMLLTDRNINTSFFD 140
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 114 bits (274), Expect = 2e-24
Identities = 62/185 (33%), Positives = 91/185 (49%), Gaps = 2/185 (1%)
Frame = +1
Query: 100 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 273
A LG L G D ++N ++T H N +PL++GAPD+AFPR
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
Query: 274 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 453
+NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G S
Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262
Query: 454 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 633
S + ++PLF +V +TA+ AGAIT+LLTDRN
Sbjct: 263 SILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFG 322
Query: 634 TSFFD 648
T+FFD
Sbjct: 323 TTFFD 327
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 107 bits (258), Expect = 2e-22
Identities = 65/217 (29%), Positives = 89/217 (41%), Gaps = 2/217 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 177
I + NHK IGT Y EL +PG G Q+YN+++T H
Sbjct: 16 INTVNHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVL 75
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N ++PL+LGAP++AFPR+N + F + G G+
Sbjct: 76 MIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGS 135
Query: 358 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
T YPPLS S+D I LH GI S + DQ+ +F
Sbjct: 136 SWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMF 194
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V +T+F AG++ LL DRN NTSF+D
Sbjct: 195 VWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYD 231
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 104 bits (250), Expect = 2e-21
Identities = 59/127 (46%), Positives = 68/127 (53%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 183
+ STNHKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 8 LXSTNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMI 67
Query: 184 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 363
N LVPL++GAPD+AFPR+NN+ F VE GAGTG
Sbjct: 68 FXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGW 127
Query: 364 TVYPPLS 384
TVYPPL+
Sbjct: 128 TVYPPLA 134
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 103 bits (247), Expect = 4e-21
Identities = 65/215 (30%), Positives = 86/215 (40%), Gaps = 2/215 (0%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXXXX 183
S +HK IG Y EL G L GD Q YN ++T+H
Sbjct: 10 SVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMV 69
Query: 184 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 363
N +P++ G PD+ FPR+NN+ F + E G G G
Sbjct: 70 FAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGW 129
Query: 364 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 543
T+YP L H + D +F++HL GISS SF LF+
Sbjct: 130 TLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIW 189
Query: 544 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
A ITA AG +T++L DRN NTSF+D
Sbjct: 190 AALITAILLIITLPVLAGGVTLILCDRNFNTSFYD 224
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 99 bits (238), Expect = 5e-20
Identities = 60/213 (28%), Positives = 91/213 (42%), Gaps = 1/213 (0%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
S NHKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 11 SVNHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFF 70
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 369
N +PL++ D++ PR+NN+ + G G G T+
Sbjct: 71 FVMPTSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTM 130
Query: 370 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*A 546
YPPLS++ G +DLA+FSLH+AG+SS F L P+ +
Sbjct: 131 YPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWT 190
Query: 547 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
+ T+ A +T+LL DR+ +TSF+
Sbjct: 191 LFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFY 223
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 90.2 bits (214), Expect = 4e-17
Identities = 54/132 (40%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 177
+YSTN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N LVP+++GAPD+AFPR+NNI F VE GAGT
Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124
Query: 358 G*TVYPPLSSNI 393
G TV LS I
Sbjct: 125 GWTVKCKLSQII 136
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 87.8 bits (208), Expect = 2e-16
Identities = 51/118 (43%), Positives = 61/118 (51%)
Frame = +1
Query: 103 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 282
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFPR+NN
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 283 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 456
+ F + G + PL G SVDLAIF LHLAG+SS
Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 84.2 bits (199), Expect = 2e-15
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXX 177
++STNHKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 9 LFSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFL 68
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N VP+++G+PD+AFPR+NNI F +VE G G+
Sbjct: 69 MIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGS 128
Query: 358 G*TV 369
G TV
Sbjct: 129 GWTV 132
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 82.6 bits (195), Expect = 7e-15
Identities = 79/210 (37%), Positives = 91/210 (43%), Gaps = 1/210 (0%)
Frame = +1
Query: 19 HKDIGTL-YXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 195
HKD GTL + L G +IG QI VTA A
Sbjct: 1 HKDXGTLXFXFXXWSAXFXGXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFV 60
Query: 196 XXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYP 375
L PL +GAP +A PR+ N+ F + G G VYP
Sbjct: 61 MPTLXGGFGXXLXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYP 120
Query: 376 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 555
P SS +AH +VDL IF LHLAGISS ++ LF
Sbjct: 121 PXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVX 180
Query: 556 TAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
A AIT+L R N SFF
Sbjct: 181 XXXXLILSXPVLAAAITMLXXXRXXNXSFF 210
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 81.4 bits (192), Expect = 2e-14
Identities = 65/220 (29%), Positives = 89/220 (40%), Gaps = 8/220 (3%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
+ +HKDIG LY EL +PG + + YN+++T+H
Sbjct: 91 TVDHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFL 150
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXX--XXXXXXXXXXXIVE-NGAGTG 360
N L+PL++GA D+AFPRIN I F I E A TG
Sbjct: 151 FATPIIAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTG 209
Query: 361 *TVYPPLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 525
T+Y PLS N A+ G VDL + LHL+G+S+ S+
Sbjct: 210 WTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWAN 267
Query: 526 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
L +F + + AI +LL DRN TSFF
Sbjct: 268 LDIFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF 307
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 81.0 bits (191), Expect = 2e-14
Identities = 39/65 (60%), Positives = 45/65 (69%)
Frame = +1
Query: 238 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 417
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 418 LAIFS 432
LAI+S
Sbjct: 61 LAIYS 65
Score = 38.7 bits (86), Expect = 0.12
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +3
Query: 537 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 644
CM C +Y TCFS S+Y IIN K KY IF
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIF 132
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 77.0 bits (181), Expect = 4e-13
Identities = 59/215 (27%), Positives = 83/215 (38%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 183
I S NH D+ LY +L P L D +YN VT H
Sbjct: 4 IMSVNHIDVSLLYFSLGIFSALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMV 61
Query: 184 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 363
N L+P PD+ FPR+N + F ++ + A G
Sbjct: 62 FFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNALSF-----WLMPFSLSLLLFSMASAGW 116
Query: 364 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 543
T YPPLSS SV+ ++FSLHLAGI+S + L LF
Sbjct: 117 TFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCW 170
Query: 544 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
++ + + A IT++LTD++L T F+D
Sbjct: 171 SIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYD 205
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 75.8 bits (178), Expect = 9e-13
Identities = 47/132 (35%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 177
++STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAIL 70
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N L+PL+LGA D+AF R+NNI F +VE GAGT
Sbjct: 71 MIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGT 130
Query: 358 G*TVYPPLSSNI 393
G TV SS +
Sbjct: 131 GWTVKKICSSKM 142
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 74.9 bits (176), Expect = 1e-12
Identities = 54/219 (24%), Positives = 87/219 (39%), Gaps = 4/219 (1%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQI--YNTIVTAHAX 174
I + NHK +G Y EL + +I + + YN I T H
Sbjct: 9 ITNCNHKTLGLYYLWFSFLFGSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGI 68
Query: 175 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG 354
N +P++ G+P++A+PRIN+I E G G
Sbjct: 69 IMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGG 128
Query: 355 TG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 531
TG T+YPPLS+++ +VD+ IF L ++G++S + L
Sbjct: 129 TGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILS 188
Query: 532 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
+ ++ IT+ G + +LL+D + NT FFD
Sbjct: 189 VSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFD 227
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 74.5 bits (175), Expect = 2e-12
Identities = 55/216 (25%), Positives = 83/216 (38%), Gaps = 3/216 (1%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDD--QIYNTIVTAHAXXX 180
S NHK IG Y EL G +I D +IYN + T H
Sbjct: 14 SGNHKIIGISYLWLAYWFGMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIM 73
Query: 181 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 360
N L P++LG D+ +PR+N +E G+GTG
Sbjct: 74 VFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTG 133
Query: 361 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 540
T+YPPLS+++++ G +D IF L AGI+S D++
Sbjct: 134 WTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAA 191
Query: 541 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
++ +T+F ++ DR+ NT FF+
Sbjct: 192 WSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFE 227
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 73.3 bits (172), Expect = 5e-12
Identities = 55/215 (25%), Positives = 79/215 (36%), Gaps = 1/215 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 183
I +T+HKDIG LY +L P S Y VT H
Sbjct: 16 ITTTDHKDIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIML 75
Query: 184 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG 360
N +VPL +GA D+AFPR+N + + E+GA G
Sbjct: 76 LWFASPFAFGLA-NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVG 134
Query: 361 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 540
T+Y PL++ I G +DLA ++ L +S + ++P+F
Sbjct: 135 WTLYAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFT 194
Query: 541 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
++ T +LL DRNL T FF
Sbjct: 195 WSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFF 229
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 72.5 bits (170), Expect = 8e-12
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +1
Query: 376 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 555
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 556 TAFXXXXXXXXXAGAITILLTDR 624
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +3
Query: 210 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 335
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 72.1 bits (169), Expect = 1e-11
Identities = 53/219 (24%), Positives = 88/219 (40%), Gaps = 6/219 (2%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI----GDDQIYNTIVTAHAXX 177
+T+HK IG LY EL G I + IYN +T H
Sbjct: 15 TTSHKIIGILYGYMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLI 74
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF-XXXXXXXXXXXXXXIVENGAG 354
N L+P+++G +++ PR+N I F ++
Sbjct: 75 MLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPIS 134
Query: 355 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 531
+G T+YPPLS+ A G ++DL++ +H+ GISS +F +
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNIN 194
Query: 532 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
++ ++ +T+ AIT LL DRN+N++ +D
Sbjct: 195 IYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYD 233
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 71.7 bits (168), Expect = 1e-11
Identities = 45/168 (26%), Positives = 65/168 (38%), Gaps = 1/168 (0%)
Frame = +1
Query: 145 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 324
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 325 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 501
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 502 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
++ +LPL + + +TA A +LL DR+ T FF
Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFF 253
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 69.7 bits (163), Expect = 6e-11
Identities = 49/178 (27%), Positives = 71/178 (39%)
Frame = +1
Query: 115 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 294
PG + D + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 295 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 474
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 475 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
+F + LFV + AGA+T+L D+ L T+FF+
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFN 177
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 69.7 bits (163), Expect = 6e-11
Identities = 51/215 (23%), Positives = 78/215 (36%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 183
+ + +HK IG +Y +L P + +++N + T H
Sbjct: 27 VSTLDHKRIGIMYILTAVFYLAVGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMV 86
Query: 184 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 363
N VPL++GA D+AFPR+N+ F + + G
Sbjct: 87 FLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGW 145
Query: 364 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 543
Y PLSS + VD I L + GI S S ++PLFV
Sbjct: 146 FSYVPLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVW 205
Query: 544 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
+ + A A+ +LL DR L ++FFD
Sbjct: 206 MMLMQAILIILALPALNSALAMLLIDRWLGSAFFD 240
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 69.7 bits (163), Expect = 6e-11
Identities = 42/124 (33%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 177
+YSTN KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVL 65
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT 357
N L+PL++GA D++F R+NNI F +VE+GAGT
Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGT 125
Query: 358 G*TV 369
G TV
Sbjct: 126 GWTV 129
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 68.1 bits (159), Expect = 2e-10
Identities = 55/217 (25%), Positives = 81/217 (37%), Gaps = 2/217 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXX 180
I++T+HK +G LY EL G I DD +YNT + H
Sbjct: 9 IFTTDHKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAM 68
Query: 181 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 360
N +PL++GA D+AFPR+N + + +
Sbjct: 69 ILAFQIPALTGFFANYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIM 128
Query: 361 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 540
T YPP S I H + FS+ L G +S +++L +FV
Sbjct: 129 WTGYPPYSI-ITHGNTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFV 185
Query: 541 *AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFD 648
A + AF G A+T+L D+ + T FFD
Sbjct: 186 WAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFD 221
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 67.3 bits (157), Expect = 3e-10
Identities = 51/214 (23%), Positives = 79/214 (36%), Gaps = 2/214 (0%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
+ +HKDIG LY EL + +YN ++T+H
Sbjct: 65 TVDHKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFL 124
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVEN--GAGTG* 363
N +PL++ A D+AFPRIN I F ++ A T
Sbjct: 125 FGTPMIAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSW 183
Query: 364 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 543
T+Y PLS ++ +VD+ + LHL G+S+ + L +F
Sbjct: 184 TMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSW 241
Query: 544 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
+ + A+ +LL DRN T+FF
Sbjct: 242 TMLTQSGLILFAFPLFGSALIMLLLDRNFGTTFF 275
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 65.3 bits (152), Expect = 1e-09
Identities = 49/214 (22%), Positives = 73/214 (34%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 183
I + +HK +G +Y A+L P + D YN I T H
Sbjct: 48 ITTVDHKKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMI 107
Query: 184 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 363
N +VPL +GA D+AFP +NN+ F ++ G
Sbjct: 108 IFMAMPFLIGLI-NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGW 166
Query: 364 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 543
T Y PL+SN G + + L +AGI + + ++P+F
Sbjct: 167 TSYMPLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTW 226
Query: 544 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
IT A+ +L DR FF
Sbjct: 227 TTLITMVIIVFAFPVLTVALALLSFDRLFGAHFF 260
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 63.7 bits (148), Expect = 4e-09
Identities = 49/215 (22%), Positives = 77/215 (35%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 183
+ + +HK IG ++ EL PG I D YN + T H
Sbjct: 30 LLTQDHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMI 89
Query: 184 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 363
N L+P+++GA D+AFP++N + F +V+ GA TG
Sbjct: 90 FLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNLLSF-YVYLAGAVVALFGMVQGGADTGW 148
Query: 364 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 543
T Y P S+ + V L F L G SS + +LPLFV
Sbjct: 149 TFYTPYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVW 205
Query: 544 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
++ T+ ++ ++ + FD
Sbjct: 206 SIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFD 240
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 63.7 bits (148), Expect = 4e-09
Identities = 50/212 (23%), Positives = 73/212 (34%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
+T+HK IG +Y +LG P + +YN + T H
Sbjct: 28 TTDHKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFL 87
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 369
N +VPL++GA D+AFPR+N + V G
Sbjct: 88 GLMPLNVGLG-NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFA 146
Query: 370 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 549
Y PL+ VD I + L G++S + +++PLFV
Sbjct: 147 YAPLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQ 206
Query: 550 GITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
+ AF A LL DR+ T FF
Sbjct: 207 LVVAFILIFAFPVLTVATIQLLFDRHFGTRFF 238
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 63.7 bits (148), Expect = 4e-09
Identities = 58/213 (27%), Positives = 78/213 (36%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
S +HK IG LY L +P + +YN +VT H
Sbjct: 107 SLDHKRIGLLYFVFGLWGGFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFF 166
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 369
N +P+ L D+ PR+N++ G G G T+
Sbjct: 167 FLMPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELSLYY--GCGIGWTL 224
Query: 370 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 549
YPPLS G VD +FSLHLAG+SS SF+ + V A
Sbjct: 225 YPPLSI-WEGSGFGVDYLMFSLHLAGVSS----LIGSVNFISTIFSRLSFN-CSIIVWAY 278
Query: 550 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
T+ A IT+LL DRN T+FF+
Sbjct: 279 LFTSVLLLLSLPVLASGITMLLFDRNFGTAFFE 311
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 63.7 bits (148), Expect = 4e-09
Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 1/214 (0%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
+T+HK +G +Y AEL PG ++ +N + T H
Sbjct: 35 TTDHKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLL 94
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGT-G*T 366
N ++PL +GAPD+AFPR+N F + GA G T
Sbjct: 95 YGTPIVWGFA-NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWT 153
Query: 367 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 546
+Y PLS I G D+ I + GI S + ++P+F
Sbjct: 154 MYSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWN 213
Query: 547 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
+ + + A +L DR L +D
Sbjct: 214 IFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYD 247
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 61.7 bits (143), Expect = 1e-08
Identities = 54/214 (25%), Positives = 73/214 (34%)
Frame = +1
Query: 7 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 186
+ +HK IG Y EL P ++YN ++T H
Sbjct: 23 FCVDHKVIGIQYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIF 82
Query: 187 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 366
N L+PL++G D+AFPR+N + F V G T
Sbjct: 83 LWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWT 140
Query: 367 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 546
YPPLS G +L I SL L G SS +PLF A
Sbjct: 141 SYPPLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWA 198
Query: 547 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
+ T+ A A+ +L D TSFF+
Sbjct: 199 MLATSSLILLSTPVLASALILLSFDLIAGTSFFN 232
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 61.7 bits (143), Expect = 1e-08
Identities = 47/214 (21%), Positives = 74/214 (34%), Gaps = 1/214 (0%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
+ +HK IG +Y +L P + + YN I+T H
Sbjct: 21 TVDHKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFF 80
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*T 366
N +VPL+LGA D+A PR+N + GA G T
Sbjct: 81 FIIQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWT 140
Query: 367 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 546
Y P S A VD + ++ L G SS S ++P++V +
Sbjct: 141 FYYPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWS 197
Query: 547 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
V + A ++L +R + S+F+
Sbjct: 198 VFAASVLNLFSLAGLTAATLLVLLERKIGLSWFN 231
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 61.3 bits (142), Expect = 2e-08
Identities = 52/214 (24%), Positives = 76/214 (35%), Gaps = 1/214 (0%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXXX 186
+ +HK IG Y +L P + IG D+ YN I T H
Sbjct: 26 TVDHKIIGRRYTVTAFVFLALGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMF 84
Query: 187 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*T 366
LVPL++G IAFPR+N + V+ G G
Sbjct: 85 LFAVPVMQAMAIY-LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWF 143
Query: 367 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 546
Y PLS G+ D+ + +S+ S D++PLFV +
Sbjct: 144 AYVPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWS 203
Query: 547 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
+ +T+F A T L+ DR + T FF+
Sbjct: 204 MLVTSFLVILAMPAIMIASTSLILDRLVGTHFFN 237
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 61.3 bits (142), Expect = 2e-08
Identities = 51/209 (24%), Positives = 76/209 (36%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 183
+ + +HK IG ++ EL PG I D YN T H
Sbjct: 37 LLTVDHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMI 96
Query: 184 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 363
N ++PL+LGA D+AFPR+N + ++ G TG
Sbjct: 97 FLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNLLSL-YIYLAGAVLALWGMLNGGLDTGW 155
Query: 364 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 543
T Y P S AH +V +F + G SS ++ ++PLFV
Sbjct: 156 TFYTPYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVW 212
Query: 544 AVGITAFXXXXXXXXXAGAITILLTDRNL 630
A+ T+ G + +L+T NL
Sbjct: 213 AIYATS-CIQVLATPVIGLLLVLVTVENL 240
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 60.5 bits (140), Expect = 3e-08
Identities = 52/216 (24%), Positives = 77/216 (35%), Gaps = 3/216 (1%)
Frame = +1
Query: 7 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 186
++T+ K IG Y EL P + + D +YN + T H
Sbjct: 32 FNTDAKVIGIQYIATAMLFLLVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLF 91
Query: 187 XXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG* 363
N L+P ++GAPD+AFP++N F G A +G
Sbjct: 92 LFLFPILNGFN-NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGW 150
Query: 364 TVYPPLS--SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
YPP+S + + H L I ++ L+GISS F ++P+F
Sbjct: 151 WSYPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVF 210
Query: 538 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
V G +LL D + TSFF
Sbjct: 211 VWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFF 246
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 60.1 bits (139), Expect = 5e-08
Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Frame = +1
Query: 139 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 318
+ Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145
Query: 319 XXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 486
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205
Query: 487 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
+ +LPL + A+ ITA A ++L DR + T FF
Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFF 258
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 334 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 456
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 56.0 bits (129), Expect = 7e-07
Identities = 47/214 (21%), Positives = 74/214 (34%), Gaps = 2/214 (0%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
+TNHKDIG LY EL + G+ + YN V+ H
Sbjct: 19 TTNHKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFW 78
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 369
N LVPL +GA D+AFPR+N + + G T+
Sbjct: 79 FISPFAFGFA-NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTM 137
Query: 370 YPPLS--SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 543
Y PL+ + I G + +L + + +P+F
Sbjct: 138 YAPLNTPAYIPGEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSL 197
Query: 544 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
++ +T + A+ IL +D L T++F
Sbjct: 198 SINLTVWMMLFAFAALLAALMILASDHILGTTYF 231
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 55.6 bits (128), Expect = 1e-06
Identities = 53/216 (24%), Positives = 80/216 (37%), Gaps = 1/216 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXX 180
++ST+H D+G LY AEL PG+ I D +N + T H
Sbjct: 15 MFSTHHTDVGLLYLISSLGFLFLGGALALLIRAELFFPGTQFIADSMTFNRMFTVHG-TT 73
Query: 181 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 360
N VP+++ D+A+P++N I F + T
Sbjct: 74 LIFLFILPFASAVGNYFVPIMVRYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT- 132
Query: 361 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 540
PP S I+ G + D+ IF L + GISS S Q+PL
Sbjct: 133 ----PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLA 187
Query: 541 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
+ ++ A A+ +LLTDR + FF+
Sbjct: 188 WSYLSSSLIVLVALPTFAAALLMLLTDRLGVSGFFN 223
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 55.2 bits (127), Expect = 1e-06
Identities = 44/175 (25%), Positives = 68/175 (38%), Gaps = 4/175 (2%)
Frame = +1
Query: 133 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 312
+ + Y +VT H N L+PL +GA D+A +N + +
Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157
Query: 313 XXXXXXXIVENGAGTG*-TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 480
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYI 217
Query: 481 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
SF +LPL + A ITA A +L+ DR+L TSFF
Sbjct: 218 TTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFF 272
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 54.4 bits (125), Expect = 2e-06
Identities = 51/215 (23%), Positives = 73/215 (33%), Gaps = 3/215 (1%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNP-GSLIG--DDQIYNTIVTAHAXXX 180
S +HK IG +Y +L G G + Y+ I TAH
Sbjct: 52 SVDHKKIGVMYIIVAMIMLLRGFADALMMRTQLAMATGGAHGVFPPEHYDQIFTAHGVIM 111
Query: 181 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 360
N +VPL +GA D+AFP +N++ F V N A TG
Sbjct: 112 IIFMAMPFMTGLM-NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTG 170
Query: 361 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 540
YPPL+ VD I++L ++GI + +P+F
Sbjct: 171 WVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFT 230
Query: 541 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
GA+ +L DR L+ FF
Sbjct: 231 WTCTWANVLIATSFPILTGALAMLALDRYLDFHFF 265
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 54.0 bits (124), Expect = 3e-06
Identities = 41/213 (19%), Positives = 73/213 (34%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
+ +HK I LY +L P + Q YN ++T H
Sbjct: 21 TVDHKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFL 80
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 369
N +VPL +GA D++FP +N + F + G T
Sbjct: 81 AAMPLLFALM-NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTS 139
Query: 370 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 549
Y LS + +G +D + L ++G+ + ++ +LPLF
Sbjct: 140 YASLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTT 197
Query: 550 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
+ + + +++ DR T+FF+
Sbjct: 198 FVASALILFAFPPLTVGLALMMLDRLFGTNFFN 230
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 53.6 bits (123), Expect = 4e-06
Identities = 51/218 (23%), Positives = 78/218 (35%), Gaps = 6/218 (2%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGN--PGSLIGD---DQIYNTIVTAHAX 174
+TN IG LY + N PGS + D + +Y ++ H
Sbjct: 11 TTNAHYIGILYILLSIINFVLAGIAAMYMRLTIANTPPGSPVQDPFNELLYTWFMSLHGL 70
Query: 175 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGA 351
N LVP ++GAPD+ +PRIN + F + ++G
Sbjct: 71 GMLLLFAMQAVAGAA-NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGD 129
Query: 352 GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 531
G T+YPPLS+ + VDL + + +AG SS +
Sbjct: 130 SIGWTLYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMS 187
Query: 532 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
LF +V + A +LL +R+L FF
Sbjct: 188 LFAWSVLAASMLMVTALPPLAAGAIMLLLERHLGMHFF 225
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 52.4 bits (120), Expect = 9e-06
Identities = 46/213 (21%), Positives = 71/213 (33%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
+ +HK IG Y +L P + + Y+++ T H
Sbjct: 46 TVDHKRIGLRYIVTAFVFLLLGGVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFL 105
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 369
N L PL+LG+ D+AFPR+ + + G
Sbjct: 106 YALPVLSGFA-NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFN 164
Query: 370 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 549
Y PL+S G ++D+ + L GIS+ S D+LP+ V
Sbjct: 165 YVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGT 224
Query: 550 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
+ + A +L DRN T FFD
Sbjct: 225 LTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFD 257
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 50.4 bits (115), Expect = 4e-05
Identities = 49/214 (22%), Positives = 71/214 (33%), Gaps = 2/214 (0%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAE--LGNPGSLIGDDQIYNTIVTAHAXXXX 183
ST+HK IG +Y A+ +G G + D + + + H
Sbjct: 73 STDHKKIGIMYVVLALVMLTRAIAEAVLMRAQGAVGLGGGFLSSDH-FAQLFSTHGTIMI 131
Query: 184 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 363
N +VPL +GA D+AFP +N+I +V + G
Sbjct: 132 FFMAMPFLTGLI-NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGW 190
Query: 364 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 543
YPP + + + G VD I+SL LA + S +PLF
Sbjct: 191 FGYPPYTETLYNPGIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTW 250
Query: 544 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
TA L DR L+ FF
Sbjct: 251 TALCTAIMMIFAMPPLTVVTLQLALDRYLDFHFF 284
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 50.0 bits (114), Expect = 5e-05
Identities = 38/184 (20%), Positives = 62/184 (33%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
+ NH D+G ++ A+L P S + YN + T H
Sbjct: 26 TVNHTDLGRMFLTVAVFFFVVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFL 85
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 369
L+P +LG+ D+AFPR+ F + +G +
Sbjct: 86 FAIPVFEGFAVY-LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFM 144
Query: 370 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 549
YPPLSS + G + D + + IS+ S ++P+F
Sbjct: 145 YPPLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYA 204
Query: 550 GITA 561
+TA
Sbjct: 205 LVTA 208
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 50.0 bits (114), Expect = 5e-05
Identities = 51/219 (23%), Positives = 75/219 (34%), Gaps = 5/219 (2%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSL-IGDDQIYNTIVTAHAXXX 180
++S + K I Y +LG PG+ D Y +T H
Sbjct: 33 VFSQDAKVIAIQYSLTASAIGLVALVLSWLMRLQLGFPGTFSFIDANQYLQFITMHGMIM 92
Query: 181 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGT 357
N L+PL++GA D+ FP +N + + V G G
Sbjct: 93 VIYLLTALFLGGFGNYLIPLMVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGA 152
Query: 358 G*TVYPP--LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 531
G T+YPP + S + + L + SL L I + +LP
Sbjct: 153 GWTLYPPQAILSGTPGQDWGIVLMLSSLILFIIGFTMGGLNYVVTVLQARTRGMTLMRLP 212
Query: 532 LFV*AV-GITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
L V + T G++ +LL DR L TSFF
Sbjct: 213 LTVWGIFTATVMALLAFPALFVGSVMLLL-DRLLGTSFF 250
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 48.8 bits (111), Expect = 1e-04
Identities = 49/217 (22%), Positives = 72/217 (33%), Gaps = 5/217 (2%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAEL-----GNPGSLIGDDQIYNTIVTAHAX 174
+ +HK IG +Y +L G+ G L + Y+ I TAH
Sbjct: 51 TVDHKKIGVMYIIVAMVMLLRGFADAIMMRTQLAAATGGSEGYL--PPEHYDQIFTAHGV 108
Query: 175 XXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG 354
N VPL +GA D+AFP +N++ F V A
Sbjct: 109 IMIIFMAMPFFTGLM-NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAK 167
Query: 355 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 534
TG YPPL+ G VD I++L L+G+ + +P+
Sbjct: 168 TGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPI 227
Query: 535 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
F A+ +L DR L+ F
Sbjct: 228 FTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIF 264
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = +3
Query: 540 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF 644
M C +YS +TC WSYYN IN SKLKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 47.2 bits (107), Expect = 3e-04
Identities = 44/219 (20%), Positives = 74/219 (33%), Gaps = 4/219 (1%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 183
+ + +HK IG +Y +L PG + + +N + T HA
Sbjct: 24 VATVDHKRIGIMYGVTGFFFFLVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMI 83
Query: 184 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAG--- 354
N +PL++GA D+AFPR+N + ++ G
Sbjct: 84 FLGVMPLLSAFM-NYFLPLMIGARDVAFPRLNAFSYWIYLFGALFINAGWLMGTAGGHVP 142
Query: 355 -TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 531
G Y L+S G D L L GI + + ++P
Sbjct: 143 DIGWFGYANLTSVQFTSGLGPDFWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMP 202
Query: 532 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
+FV +T+ A+ +L+ DR +FF+
Sbjct: 203 VFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFE 241
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 47.2 bits (107), Expect = 3e-04
Identities = 37/140 (26%), Positives = 44/140 (31%)
Frame = +3
Query: 216 IWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YR 395
I KL P NK +KIL TPL Y N C K C + +NSLP Y
Sbjct: 62 IRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYL 121
Query: 396 T*RKIRRSCYFFTTFSXXXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXX 575
T R +F T CM +YS
Sbjct: 122 TLGPFRSYNHFCPTSCSSVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTS 181
Query: 576 XTTCFSWSYYNIINRSKLKY 635
+ S+YNI K KY
Sbjct: 182 FSPSIGSSHYNITYWPKPKY 201
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 47.2 bits (107), Expect = 3e-04
Identities = 53/225 (23%), Positives = 75/225 (33%), Gaps = 11/225 (4%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG------SLIG----DDQIYNT 153
I++TNHK IG LY +L P S+ D YN
Sbjct: 27 IFTTNHKQIGLLYILTSLFFFIGGGVMALLMRVQLAIPRYDLVKYSIFSGRFLDALQYNQ 86
Query: 154 IVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXX 333
+VT H L+PL +G+ D+ +PR+N + +
Sbjct: 87 LVTIHGLTMLIWFLGPLGTGFGIY-LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGF 145
Query: 334 IVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXX 510
+ G TG TVY PLSS D A ++ L GI +
Sbjct: 146 FLPGGNLDTGWTVYEPLSSFKFTPYLGADTAAAAVVLRGIGTIIASTEILATIFKARAKG 205
Query: 511 XSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
LPLFV AV A G +LL ++ S++
Sbjct: 206 YRMMNLPLFVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYY 250
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 46.8 bits (106), Expect = 5e-04
Identities = 33/176 (18%), Positives = 61/176 (34%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
+ NH D+G ++ A+L +P S + Y + T H
Sbjct: 26 TVNHTDLGRMFLGASVVFFLIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFL 85
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 369
L+P +LG+ D+A+PR++ F + +G +
Sbjct: 86 FAIPMFEGLTIY-LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFM 144
Query: 370 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 537
YPPL+S + G + D + + IS+ S D++P++
Sbjct: 145 YPPLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIY 200
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 46.4 bits (105), Expect = 6e-04
Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXX 177
+Y+ NHK I Y EL +P S GD Y +VTAH
Sbjct: 55 VYTINHKRIAINYLYFSMVTGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAHGLI 114
Query: 178 XXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 291
N L+P +G+ D+A+PR+N+I F
Sbjct: 115 MVFFVVVPILFGGFANFLIPYHVGSKDVAYPRLNSIGF 152
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 46.0 bits (104), Expect = 8e-04
Identities = 40/213 (18%), Positives = 70/213 (32%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
+ +H+ +G + +L P + + YN + T H
Sbjct: 52 AVSHRAVGKRFLITGFIFFLIAGVFALLVRLQLMVPENTFLSSETYNQLFTMHGTIMMFL 111
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 369
L+PL++GA D+ FPR+ + + + G +
Sbjct: 112 FAIPMLEGFAVY-LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFM 170
Query: 370 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 549
Y PLS++ G S D + + LA I+S S ++P+ + +
Sbjct: 171 YVPLSTSAYTEGLSADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYL 230
Query: 550 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
TAF +L +R L FFD
Sbjct: 231 LATAFMIAIAFPPLIIGSILLEAERLLGLPFFD 263
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 44.4 bits (100), Expect = 0.002
Identities = 31/141 (21%), Positives = 54/141 (38%)
Frame = +1
Query: 223 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 402
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 403 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 582
VD +S+ ++GI + F+++ +F+ +
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTCLCSNILILISF 238
Query: 583 XXXAGAITILLTDRNLNTSFF 645
+ + DR L+T F+
Sbjct: 239 PILTILLFQIFLDRTLSTHFY 259
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 44.0 bits (99), Expect = 0.003
Identities = 42/213 (19%), Positives = 66/213 (30%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
+T+HK IG LY +L P + YN ++T HA
Sbjct: 29 TTDHKKIGLLYIIVSILGFCLGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFF 88
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 369
N +PL LG D+A PR+N G T
Sbjct: 89 FLIPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTF 148
Query: 370 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 549
Y PL+ + G SV + ++ L G+ S ++P+F ++
Sbjct: 149 YYPLTMDGNQTGVSVFMV--AVILNGLGSLLGSANFAATIVNLRAPGMGLWKMPVFAWSI 206
Query: 550 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
T+ A + + L S F+
Sbjct: 207 FATSILQLLTLGGLTAAALLTYLEIKLGLSMFN 239
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 43.2 bits (97), Expect = 0.006
Identities = 37/181 (20%), Positives = 61/181 (33%)
Frame = +1
Query: 103 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINN 282
+L P + D + YN + + H ++PL+LG D+ FPR+N
Sbjct: 64 QLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLMLGTRDMTFPRLNA 122
Query: 283 IRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXX 462
+ ++ G YPPL+ G +D + IS+
Sbjct: 123 FGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYTTVVTFMEISALV 182
Query: 463 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSF 642
S +++P+FV AV + +F A +L DR F
Sbjct: 183 AAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDRMAGMHF 242
Query: 643 F 645
F
Sbjct: 243 F 243
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 43.2 bits (97), Expect = 0.006
Identities = 36/172 (20%), Positives = 57/172 (33%), Gaps = 3/172 (1%)
Frame = +1
Query: 139 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 318
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 319 XXXXXIVENGAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXX 489
G G T YP L+ G + + + G SS
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209
Query: 490 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
+F +LP+ + + ITA + + DR T FF
Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFF 261
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 41.5 bits (93), Expect = 0.017
Identities = 41/184 (22%), Positives = 67/184 (36%), Gaps = 5/184 (2%)
Frame = +1
Query: 109 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 288
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 289 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS--NIAHRGRSVDLAIFSLHLA--GIS 453
F + +G +G T Y LS+ A G + ++ + +A I+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSAVGGDAGPGMAYGQTLWGISIAIFCIA 193
Query: 454 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLN 633
S S ++P+ A IT+ A +L DR
Sbjct: 194 SLLGSLNFIATTLDLRTKGMSLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAG 253
Query: 634 TSFF 645
TSFF
Sbjct: 254 TSFF 257
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 40.3 bits (90), Expect = 0.039
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +1
Query: 403 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 582
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 583 XXXAGAITILLTDRNLNT 636
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 39.9 bits (89), Expect = 0.052
Identities = 44/215 (20%), Positives = 68/215 (31%), Gaps = 1/215 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNP-GSLIGDDQIYNTIVTAHAXXX 180
I + N++ IG LY +L P L+G D YN I T H
Sbjct: 34 ISAVNNQVIGILYVGAAFLFFILAGILGLIMRTQLAVPENDLVGQD-FYNQIFTVHGTTM 92
Query: 181 XXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG 360
L+P +L A D+ FPR++ + G
Sbjct: 93 MFLFAVPVVEALGVM-LLPQMLAARDLPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGG 151
Query: 361 *TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 540
+YPPL+ G + D + + IS+ S ++P+F
Sbjct: 152 WFMYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFA 211
Query: 541 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
A+ I A A +L +R+ FF
Sbjct: 212 WAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFF 246
>UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2;
Yarrowia lipolytica|Rep: Cytochrome c oxidase subunit I
- Yarrowia lipolytica (Candida lipolytica)
Length = 399
Score = 39.5 bits (88), Expect = 0.069
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 171
++STN KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHA 68
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 39.1 bits (87), Expect = 0.091
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 171
+YSTN KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 38.7 bits (86), Expect = 0.12
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 150
++STNHKDIGTLY EL PG+ I G+ Q+YN
Sbjct: 9 LFSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 38.3 bits (85), Expect = 0.16
Identities = 47/216 (21%), Positives = 72/216 (33%), Gaps = 1/216 (0%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 183
+Y+TN D+G +Y +L +L D Y VT H
Sbjct: 11 LYTTNASDVGQMYIVLGIVALIIGSVNAALIRDQLSF-NNLNAVD--YYDAVTLHGIFMI 67
Query: 184 XXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG* 363
N LVP ++GA D+ +P+IN + F ++ G
Sbjct: 68 FFVVMPLSTGFA-NYLVPRMIGAHDLYWPKINALSFWMLVPAVILAAISPLL-GAVDLGW 125
Query: 364 TVYPPLS-SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 540
+Y PLS + G +L +L L+G+SS + ++PLFV
Sbjct: 126 YMYAPLSVETTVNYGLGTNLIQIALILSGLSS--TLTGVNFVMTITKMKKVPYLKMPLFV 183
Query: 541 *AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 648
TA + +R T FFD
Sbjct: 184 WGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFD 219
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 35.9 bits (79), Expect = 0.84
Identities = 30/141 (21%), Positives = 50/141 (35%)
Frame = +1
Query: 223 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 402
N +VPL +GA D+AFP +N + V + + G PL+
Sbjct: 143 NIIVPLQIGARDMAFPYLNAVGLWLTAVAAALVMLSLFVGDFSHDGWIGLIPLTELPYSP 202
Query: 403 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 582
G VD ++++ + + + ++ +LP V T
Sbjct: 203 GVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLTTNIIALTAF 262
Query: 583 XXXAGAITILLTDRNLNTSFF 645
A+ +L DR L T FF
Sbjct: 263 PILGVALAMLGADRYLGTHFF 283
>UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep:
Maturase-like protein - Pellia epiphylla
Length = 843
Score = 35.9 bits (79), Expect = 0.84
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 150
++STNHKDIGT Y EL PG+ I G+ Q+YN
Sbjct: 9 LFSTNHKDIGTPYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1
Query: 520 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF 645
DQ+ LF ++ IT AG IT+LL+DRN N FF
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFF 53
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 34.3 bits (75), Expect = 2.6
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 15 KS*RYWNIIFYFWYLIRNNWNIFKTFNS 98
KS YWNI+F+FWYLI ++ K NS
Sbjct: 344 KSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3
precursor (DNA endonuclease I- SceIII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI3 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceIII)]; n=5; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI3 precursor (DNA
endonuclease I- SceIII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI3 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceIII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 403
Score = 34.3 bits (75), Expect = 2.6
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 4 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIV 159
+YSTN KDI LY EL PGS L G+ Q++N +V
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLV 59
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 33.5 bits (73), Expect = 4.5
Identities = 28/139 (20%), Positives = 49/139 (35%)
Frame = +1
Query: 229 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 408
L+P +LGA D+ FPR++ F V G + PPL++ G
Sbjct: 167 LLPNMLGARDLPFPRLSAYAFWAYLVGGLVFFASIFVGWAPDGGWFMNPPLTTETYSPGY 226
Query: 409 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXX 588
+ D + + IS+ + ++P+F A+ + A
Sbjct: 227 NADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAMLVFALMIVFAFPA 286
Query: 589 XAGAITILLTDRNLNTSFF 645
A +L +R + FF
Sbjct: 287 VILATALLELERAFHWPFF 305
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 33.1 bits (72), Expect = 6.0
Identities = 27/149 (18%), Positives = 50/149 (33%)
Frame = +1
Query: 10 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 189
+ N+ ++G Y +L PG+ +N T H
Sbjct: 54 AVNNSEVGVWYALTALAFMLCAGVLAVLMRVQLAVPGNDFLSADRFNQFFTMHGSAMMFL 113
Query: 190 XXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 369
L+P +LGA D+ FPR++ + + + +G +
Sbjct: 114 FAVPMFEAISII-LLPALLGARDLPFPRLSAYGYWCFLIGGVFVMGSILFDAAPKSGWFM 172
Query: 370 YPPLSSNIAHRGRSVDLAIFSLHLAGISS 456
YPPL++ G D+ + L ++S
Sbjct: 173 YPPLATQ--DEGLGSDIWLLGLSFIEVAS 199
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 623 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 501
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,899,397
Number of Sequences: 1657284
Number of extensions: 7308218
Number of successful extensions: 17432
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 15942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17213
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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