Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_P03
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_03_0373 - 13194723-13195847,13196219-13196809                       29   4.2  
10_08_0849 + 21040043-21040199,21040620-21040678,21040925-210424...    28   5.6  
04_04_0057 + 22410167-22411330                                         28   5.6  
01_03_0163 + 13346586-13347809                                         28   7.4  
07_03_0831 - 21810002-21810319,21810423-21810573,21810660-218108...    27   9.8  
01_06_0751 + 31690411-31690443,31692900-31694240                       27   9.8  

>05_03_0373 - 13194723-13195847,13196219-13196809
          Length = 571

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -3

Query: 468 VSEFGGTWFQLRR*WRVETRSVIDFDLRCSAR 373
           V+E G  + QL+R WR + R ++D D R   R
Sbjct: 502 VNEAGQRFLQLQREWRSDARGIVDGDGRFKFR 533


>10_08_0849 +
           21040043-21040199,21040620-21040678,21040925-21042494,
           21042583-21042710,21042793-21043033,21043160-21043710
          Length = 901

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +1

Query: 472 LLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVD 591
           L+ +L   C ++N+   +LE+++  P +FE +    +R+D
Sbjct: 754 LVLELSELCAEQNLEVWYLEDELISPCMFEELQNQGDRID 793


>04_04_0057 + 22410167-22411330
          Length = 387

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 523 WLEEKVDLPSIFENISEVPERVDPQPPAAVLXSSP 627
           WLE +V  P    N+ + P    P P AA    SP
Sbjct: 164 WLESRVTCPLCRANLEKPPPPPPPPPAAAAASPSP 198


>01_03_0163 + 13346586-13347809
          Length = 407

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +1

Query: 271 SWAAAIDLLTNDECRLLLEVED 336
           SW AA+D +T DE R LLE  D
Sbjct: 115 SWDAALDGITADEARALLESID 136


>07_03_0831 -
           21810002-21810319,21810423-21810573,21810660-21810897,
           21811011-21811221,21811336-21811559,21811696-21811806,
           21813265-21813636,21813810-21814782
          Length = 865

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = -1

Query: 650 SVGWEVTKGLEXRTAAGGCGSTRSGTSEMFSKIEGRSTFSSN 525
           +V W   +    RTAAG   +T +G+ E+  K   R  + +N
Sbjct: 79  TVMWVANRDAPVRTAAGAASATVTGSGELLVKEGDRVAWRTN 120


>01_06_0751 + 31690411-31690443,31692900-31694240
          Length = 457

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +1

Query: 565 ISEVPERVD-PQPPAAVLXSSPFVTSQPT 648
           I E+P+R + P PPAA     P  T Q T
Sbjct: 195 IDELPDRAEAPPPPAAASTEQPEATEQAT 223


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,699,341
Number of Sequences: 37544
Number of extensions: 320119
Number of successful extensions: 769
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 751
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)