Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_P01
         (601 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0549 - 4051257-4051709,4051967-4052075,4053194-4053252,405...    29   2.2  
01_03_0284 - 14595643-14595663,14595978-14596018,14596379-145967...    29   3.8  
05_03_0460 - 14294931-14295110,14295200-14295234,14295358-142954...    28   5.0  
09_02_0389 - 8456957-8459917,8461941-8462267                           28   6.6  
01_03_0282 - 14580875-14580891,14582126-14585855                       28   6.6  

>01_01_0549 -
           4051257-4051709,4051967-4052075,4053194-4053252,
           4053339-4053445,4053711-4053867,4054110-4054169,
           4055396-4055524,4056027-4056074,4057148-4057214,
           4057948-4058006
          Length = 415

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 430 LCATRNGDRIALFIAEGGPECFQQKTENL 516
           +CA+  G R+AL+  E GPE  +++  +L
Sbjct: 288 ICASIIGQRLALYALEAGPEWIRERVRDL 316


>01_03_0284 -
           14595643-14595663,14595978-14596018,14596379-14596732,
           14597023-14597494,14597524-14600001
          Length = 1121

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = +2

Query: 230 LNVLKTEIEEAKPNGALDEVFKKYCDKSAQLKGCISSVLQGRASLCRQRLCE 385
           L  LK E+   +    LD+V+ +  DK A+LK C+     G A L   RL E
Sbjct: 260 LQKLKQEVCGKRYLLVLDDVWNRDADKWAKLKTCLVQGGAGSAILTTTRLTE 311


>05_03_0460 -
           14294931-14295110,14295200-14295234,14295358-14295457,
           14295548-14295669,14296272-14296367,14296489-14298949
          Length = 997

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = -1

Query: 178 LQGLCLQHCSWCIARSQPL*SELKSSANTPAAKIVIKTVFHISCKQGN 35
           ++GLC Q     IAR+  L  E+KSS   P  ++ +K V    C++G+
Sbjct: 322 IEGLCQQKD---IARAVKLFKEMKSSGVAPDVRL-LKKVIEAFCREGD 365


>09_02_0389 - 8456957-8459917,8461941-8462267
          Length = 1095

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 373  TTMRTTSMMPKTVPINSSTLCATRNGDRIALFIAEGGP 486
            T + TT ++ K VP NS    A RN DR+   + +G P
Sbjct: 960  TIVGTTELLRKLVP-NSKGWSAIRNMDRVYANLPDGAP 996


>01_03_0282 - 14580875-14580891,14582126-14585855
          Length = 1248

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +2

Query: 230 LNVLKTEIEEAKPNGALDEVFKKYCDKSAQLKGCISSVLQGRASLCRQRLCEPHQ 394
           L  L+ E+   +    LD+V+ +  DK ++LK C+     G   L   RL E  Q
Sbjct: 260 LQKLQQEVSGKRFLLVLDDVWNRDVDKWSKLKTCLQQGAAGSVILTTTRLAEVAQ 314


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,982,761
Number of Sequences: 37544
Number of extensions: 311429
Number of successful extensions: 892
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)