Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP10_F_P01
         (601 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical p...    28   4.4  
Z98877-15|CAB63407.3|  572|Caenorhabditis elegans Hypothetical p...    28   4.4  
Z81491-9|CAI46572.1|  185|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z81491-8|CAI46571.1|  182|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = -1

Query: 193 QCCFNLQGLCLQHCSWCIARSQPL*SELKSSANTPAAKIVIKTVFHISCKQ 41
           +C  + QGLC  +   CI        +L  +A TPA  + +    ++ C Q
Sbjct: 785 KCISDCQGLCKSNSPQCIQGCDASCQQLCGTAPTPAVPLTVNYNCNLPCDQ 835


>Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical
           protein Y69H2.10b protein.
          Length = 975

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
 Frame = +1

Query: 388 TSMMPKTVPINSSTLCATRNGDRIALFI--AEGGPECFQQKTENLKTCFLNL 537
           TS      P+NS+  C  R  DR        + G +CF   T N  TC+  L
Sbjct: 296 TSTQVCASPLNSTQTCIPRLPDRRYCIDEPCQVGMKCFDNVTSNAYTCYTKL 347


>Z98877-15|CAB63407.3|  572|Caenorhabditis elegans Hypothetical
           protein Y69H2.10a protein.
          Length = 572

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
 Frame = +1

Query: 388 TSMMPKTVPINSSTLCATRNGDRIALFI--AEGGPECFQQKTENLKTCFLNL 537
           TS      P+NS+  C  R  DR        + G +CF   T N  TC+  L
Sbjct: 296 TSTQVCASPLNSTQTCIPRLPDRRYCIDEPCQVGMKCFDNVTSNAYTCYTKL 347


>Z81491-9|CAI46572.1|  185|Caenorhabditis elegans Hypothetical
           protein D1086.12b protein.
          Length = 185

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +2

Query: 146 PRTMLKTKSLQVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGALDEVFKK 298
           PR MLK    +V+     FG C+K +  + +     E    + + D + KK
Sbjct: 97  PRLMLKIVCKKVDVLQSEFGKCMKDVQTMKIESEIFESFAKDFSFDGISKK 147


>Z81491-8|CAI46571.1|  182|Caenorhabditis elegans Hypothetical
           protein D1086.12a protein.
          Length = 182

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +2

Query: 146 PRTMLKTKSLQVEAALRTFGNCLKGLVDLNVLKTEIEEAKPNGALDEVFKK 298
           PR MLK    +V+     FG C+K +  + +     E    + + D + KK
Sbjct: 94  PRLMLKIVCKKVDVLQSEFGKCMKDVQTMKIESEIFESFAKDFSFDGISKK 144


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,647,319
Number of Sequences: 27780
Number of extensions: 270908
Number of successful extensions: 880
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)